| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_0484 |
|---|
| Symbol | |
|---|
| ID | 6308818 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 517655 |
|---|
| End bp | 519328 |
|---|
| Gene Length | 1674 bp |
|---|
| Protein Length | 557 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642649185 |
|---|
| Product | Formate--tetrahydrofolate ligase |
|---|
| Protein accession | YP_001923197 |
|---|
| Protein GI | 188579752 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG2759] Formyltetrahydrofolate synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCTCAG ACATCGAGAT CGCCCGCGCG GCGACGCTGA AGCCCATCGC CCAGGTCGCC
GAGCGGATCG GCATTCCCGA CGAGGCGCTG CACAACTACG GCAAGCACAT CGCCAAGATC
GACCACGGCT TCATCAAGTC GCTGGAGGGC AAGCCCGAGG GCAAGCTCGT CCTCGTCACC
GCGATCTCGC CGACGCCCGC GGGCGAGGGC AAGACCACGA CGACGGTGGG CCTCGGCGAC
GCGCTGAACC GCATCGGCCA GCGGGCGGTG ATGTGCCTGC GCGAGCCCTC GCTCGGCCCC
TGCTTCGGCA TGAAGGGCGG CGCCGCCGGC GGCGGCAAGG CGCAGGTCGT GCCGATGGAG
CAGATCAACC TGCACTTCAC CGGCGACTTC CACGCCATCA CCTCGGCGCA CTCGCTCGCC
GCGGCGCTGA TCGACAACCA CGTCTACTGG GCCAACGAGC TGAACATCGA CGTGCGCCGC
ATCCACTGGC GCCGCGTGGT CGACATGAAC GACCGGGCGC TTCGCGCCAT CAACCAGTCG
CTCGGCGGCG TCGCCAACGG CTTCCCGCGC GAGGACGGGT TCGACATCAC CGTCGCCTCC
GAGGTCATGG CGGTGTTCTG CCTTGCGCGT GACCTCGCCG ACCTCGAGGA GCGCCTCGGC
CGCATCGTCA TCGCCGAGAC CCGTGACCGC AAGCCGGTGA CGCTGGCCGA CGTGAAGGCT
ACCGGCGCCA TGACGGTGCT GCTCAAGGAC GCGCTGCAGC CGAACCTCGT GCAGACGCTG
GAGGGCAACC CGGCGCTGAT CCATGGCGGC CCGTTCGCCA ACATCGCCCA CGGCTGCAAC
TCGGTGATCG CCACCCAGAC CGGCCTGCGG CTGGCCGATT ACGTGGTGAC GGAAGCCGGC
TTCGGTGCCG ACCTCGGCGC GGAGAAGTTC ATCGACATCA AGTGCCGCCA GACCGGCCTC
AAGCCCTCCG CGGTCGTGAT CGTCGCCACC GTCCGTGCGC TGAAGATGCA TGGCGGCGTC
AACAAGAAGG ATCTCCAGGG CGAGAACCTC GACGCACTGG AGAAGGGCTT CGCCAACCTC
GAGCGCCACG TGAAGAACGT GCGCGGCTTC GGCCTGCCGG TCGTCGTCGG TGTGAACCAC
TTCTTCCAGG ACACCGACGC CGAGCACGCC AAGTTGAAGG AGCTGTGCCG CGACCGTCTC
CAGGTCGAGG CGATCACCTG CAAGCACTGG GCGGAAGGCG GCGCGGGCGC CGAGGAACTG
GCGCAGGCCG TGGTGAAGCT CGCCGAGGGC GAGCAGAAGC CGCTGACCTT CGCCTACGAC
ACCGAGACGA AGCTCACCGA CAAGATCAAG GCGATCGCGA CCAAGCTATA CGGCGCGGCC
GACATCCAGA TCGAATCGAA GGCGGCCACC AAGCTCGCCG GCTTCGAGAA GGACGGTTAC
GGCCACCTCC CGATCTGCAT GGCCAAGACG CAGTACTCGT TCTCGACCGA CCCGACCCTG
ATGGGCGCGC CTTCCGGCCA CCTCGTCTCG GTGCGCGACG TGCGCCTTTC GGCGGGCGCC
GGCTTCGTCG TGGCGATCTG CGGTGAGATC ATGACCATGC CGGGCCTGCC CAAGGTGCCG
GCGGCGGACA CCATCCGGTT GGACGCCAAC GGGCAGATCG ACGGGCTGTT CTAG
|
|---|
| Protein sequence | MPSDIEIARA ATLKPIAQVA ERIGIPDEAL HNYGKHIAKI DHGFIKSLEG KPEGKLVLVT
AISPTPAGEG KTTTTVGLGD ALNRIGQRAV MCLREPSLGP CFGMKGGAAG GGKAQVVPME
QINLHFTGDF HAITSAHSLA AALIDNHVYW ANELNIDVRR IHWRRVVDMN DRALRAINQS
LGGVANGFPR EDGFDITVAS EVMAVFCLAR DLADLEERLG RIVIAETRDR KPVTLADVKA
TGAMTVLLKD ALQPNLVQTL EGNPALIHGG PFANIAHGCN SVIATQTGLR LADYVVTEAG
FGADLGAEKF IDIKCRQTGL KPSAVVIVAT VRALKMHGGV NKKDLQGENL DALEKGFANL
ERHVKNVRGF GLPVVVGVNH FFQDTDAEHA KLKELCRDRL QVEAITCKHW AEGGAGAEEL
AQAVVKLAEG EQKPLTFAYD TETKLTDKIK AIATKLYGAA DIQIESKAAT KLAGFEKDGY
GHLPICMAKT QYSFSTDPTL MGAPSGHLVS VRDVRLSAGA GFVVAICGEI MTMPGLPKVP
AADTIRLDAN GQIDGLF
|
|---|
| |