Gene Mpop_0443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_0443 
Symbol 
ID6309592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp475900 
End bp476643 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content71% 
IMG OID642649144 
Productsugar fermentation stimulation protein 
Protein accessionYP_001923156 
Protein GI188579711 
COG category[R] General function prediction only 
COG ID[COG1489] DNA-binding protein, stimulates sugar fermentation 
TIGRFAM ID[TIGR00230] sugar fermentation stimulation protein 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTTCC CCTCCCCCCT GATCGAAGGG CGCCTCGTGC GGCGCTACAA GCGCTTCCTC 
GCCGATGTGG CGCTTGCCGA CGGCACGCTG GTGACGGCGC ATTGCGCCAA CCCGGGCGCG
ATGCTGGGCC TCAACGCGGA AGGGTTTCGC GTGCTGCTCT CGCCCTCGAC CAACCCGGCG
CGAAAGCTCG GGTTCTCGTG GGAACTGGTG GAGGCGGAGC TGCCCGGCGG GCCGCAATGG
GTCGGCATCA ACACGGCGCG GCCCAATGCG CTGGTCGCGG AAGCGTTTCG CGAGAACAAG
CTCGCGCCGC TCGCGGGCTA CGAGACGCTC CGGGCGGAGG TCGCCTACGG AAAGGCGAGC
CGCGTCGATT TCCTGGCGAG CGGCGGCGGG CTGCCGCCGT GCCACGTCGA GGTGAAGAAC
TGCCACCTGA TGCGGCAGGC GGGGCTCGCG GAGTTTCCCG ATTGCAAGGC CGCCCGCTCG
GCCCGCCACA TGGAGGAGCT GGCCGGCGTC GTCGCGGCAG GCGGCCGGGC GATGCTGATT
GTCGTGATTC AGATGCGGGC CGACGCCTTC GACGTCGCCC GCGACATCGA CCCGGCCTTC
GACCGGGCGC TGCGCGCGGC GCTGGCGGCC GGTGTCGAAG CCTATGCTTA CACCTGCGCG
GTCGGCCCCG AGGGCGTCGA AATTGCGGAA CCGGTACAGA TCCTCACGTC ACCAGCGAGT
CCCGCCGGCA GCGGGACGTC ATGA
 
Protein sequence
MRFPSPLIEG RLVRRYKRFL ADVALADGTL VTAHCANPGA MLGLNAEGFR VLLSPSTNPA 
RKLGFSWELV EAELPGGPQW VGINTARPNA LVAEAFRENK LAPLAGYETL RAEVAYGKAS
RVDFLASGGG LPPCHVEVKN CHLMRQAGLA EFPDCKAARS ARHMEELAGV VAAGGRAMLI
VVIQMRADAF DVARDIDPAF DRALRAALAA GVEAYAYTCA VGPEGVEIAE PVQILTSPAS
PAGSGTS