Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_0427 |
Symbol | |
ID | 6309755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 459178 |
End bp | 459720 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642649128 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_001923140 |
Protein GI | 188579695 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAGGG TCTCGCAGGA ACAGGCCAAG CTCAACCGTC AACGCGTCGT CGAGGTCGCT GCAACTCTGT TTCGGGAGCG CGGGCTGCAC GGCGTCGGCG TCGCCGACAT CATGGCGTCG GCCGGCCTGA CCCATGGCGG CTTCTACGGT CAGTTCGCCA ACAAGGAGGC CCTCGCCGCC GAGGCGTTCG ATATTGCGCT CGACGAGGAG AACCGCGGTG ACCTGGACAC CCTGGTCGCC AACTACCTGT CCCTCGGCCA TGTCCGGTCA CCCGGACGGG GATGCCCCTT GGCCGCCTTG GCAAACGACG TCGCGCGGGA GCCGCCGGGC AGTCCTGTCA GGGCGCGGTT CACCCGGGGC GTCGAGCGCT TGGCCGCCCT CCTCTCGAAC CTCTCGCCCC GGGCATCCAA GGAGCGCCGG AAGCAACGGT CCCTCGCGGC GCTGTCGACG CTCGTCGGGG CCGTCGTCCT GGCTCGGGCC GTCGACGACG ATGCGCTGGC GGAAGACCTG ATCAAGGCCG CGCAGGCATC CCTCACCGCA TGA
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Protein sequence | MPRVSQEQAK LNRQRVVEVA ATLFRERGLH GVGVADIMAS AGLTHGGFYG QFANKEALAA EAFDIALDEE NRGDLDTLVA NYLSLGHVRS PGRGCPLAAL ANDVAREPPG SPVRARFTRG VERLAALLSN LSPRASKERR KQRSLAALST LVGAVVLARA VDDDALAEDL IKAAQASLTA
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