Gene Mpop_0413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_0413 
Symbol 
ID6311873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp442303 
End bp443277 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content70% 
IMG OID642649113 
Productaliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein 
Protein accessionYP_001923126 
Protein GI188579681 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID[TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.523769 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGAC GCCGCACCGT CCTGTCCGCA TTCGCCGGAT TGTTGGGCCT CCTCGCGGCA 
GGATCGGACC TGCGGGCGGC CGATGTCGGC GAGATCCGCC TCGACTGGGC GACTTACAAT
CCCGTCAGCC TCGTCCTGAA GGAGAAGGGC TTCCTGGAGG AGGCGCTCAA GGCGCGCGGC
ATCAAGGTGC GCTGGGTCCA GTCGCTCGGC TCCAACAAGG CGCTGGAATT CCTGAACGGC
AGCGCCATCG ATTTCGGCTC CTCGGCCGGC GCGGCGGCGC TGCTGGCGCG CATCAACGGC
AACCCGGTCA AGGTCGTCTA CGCCTATTCC CGGCCGGAAT GGACCGCGCT GGTCACCCGC
AAGGAGACCG GGATCATGAA GCCCGCCGAC CTCAAGGGCA AGCGGATCGC CGTCACCCGC
GGCACCGATC CGCACATCTT TCTGATCCGC GCGCTTCAGG GCGCCGGGCT CACCGAGAAG
GACGCCAAGC TCGTCCTGCT CCAGCATGCC GACGGCCGCA CGGCGCTCGA CCGTGGCGAC
GTCGATGCCT GGGCCGGCCT CGACCCGATG ATGGCCGCCG CCGAGATCGA GAGCGGAGAC
GTGCTGTTCC ACCGCGACGC GGCCGCCAAT ACCTGGGGCG TGCTCGACGT GCGCGAGGAC
TTCGCCAAGG CGCATCCCGA CCTCGTGAAG GTCGTCATCG CCGCCTACGA GCAGGCCCGC
GCCTACGCGC TCGCCAATCC GGAGGCCCTG AAGAGCGCGC TGGTCTCGGC CACCAAGCTG
CCCGAGGCGG TGATCGCCAA GCAGATCGAG CGCACGGACC TGAGCCAGCC CGCCATCGGG
CCGGCCCAGG CCGAGAGCAT CCGCGCCGCC GGCCTCGCGC TGCAGCAGGC GGGCGTCATC
CCCGCCTCCA CCGACGTAGC GGCGGCGGTG GACGGCCTGA TCGATCCGCA ATTCAACCCG
GCACCGGCCC GCTGA
 
Protein sequence
MIRRRTVLSA FAGLLGLLAA GSDLRAADVG EIRLDWATYN PVSLVLKEKG FLEEALKARG 
IKVRWVQSLG SNKALEFLNG SAIDFGSSAG AAALLARING NPVKVVYAYS RPEWTALVTR
KETGIMKPAD LKGKRIAVTR GTDPHIFLIR ALQGAGLTEK DAKLVLLQHA DGRTALDRGD
VDAWAGLDPM MAAAEIESGD VLFHRDAAAN TWGVLDVRED FAKAHPDLVK VVIAAYEQAR
AYALANPEAL KSALVSATKL PEAVIAKQIE RTDLSQPAIG PAQAESIRAA GLALQQAGVI
PASTDVAAAV DGLIDPQFNP APAR