| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_0408 |
|---|
| Symbol | |
|---|
| ID | 6311994 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 439258 |
|---|
| End bp | 440037 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 642649108 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001923121 |
|---|
| Protein GI | 188579676 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0896853 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAACA TCCAGAGCCT TTCCAAGACC TATGCCGACG GCACCCGCGC GCTGGCCGGC
ATCGACCTTC AGGTGCCGAA TGCCGAGATC GTCGCGCTGA TCGGCGGCTC GGGCTGCGGG
AAGACGACGC TGCTGCGCCT CATCGCCGGT CTCGACCGGC CGAGCGCCGG CCGGATCGCT
CTCGACGGCG AGCCGATCAC CGCGCCCCAT CCCGGCGTCG GGCTCGTGTT TCAGGAGCCG
CGCCTGCTGC CCTGGCTCAG CGTCGCCGAC AATGTCGGCT TCGGCATCGC GCACCGGCCG
GGGCGCGAGC GGCGGGAGCG CGTCGCCCAC GCCCTGGAGC GCGTCGGCCT TGCCGAGCAT
GCGGACCGCT GGCCCCGCGA ATTGTCGGGC GGGCAGCAAC AGCGCGTCTC GATCGCCCGC
GCCTTCGTCG CCCAACCGCG GGTGCTGCTC CTCGACGAGC CGTTCTCGGC GCTCGACGCT
TTCACCCGCA AGGATCTACA TCGCCATCTC CTCGCCCTTT GGGAGGAGGT GCGGCCGACG
GTGCTGATCG TCACCCACGA CGTCGCCGAG GCGGTGGCGC TGGCCGACCG CGCCATCGTC
ATGCGCCCGC GTCCCGGCCG GCTCGACGAC ACCATCGCCC TCTCGATGCG CCGCCCGCGC
GATCCCGCGG CGGCGACGAG CGAGGCGGCG ACCCGCACGA TCCTCGCCGC CCTCGACCAT
TCGCTGCGCC CGCGCGACGC CTCCCCGGCG CCGGAACTCG CTGGGGGCAG CTCGTTCTGA
|
|---|
| Protein sequence | MLNIQSLSKT YADGTRALAG IDLQVPNAEI VALIGGSGCG KTTLLRLIAG LDRPSAGRIA
LDGEPITAPH PGVGLVFQEP RLLPWLSVAD NVGFGIAHRP GRERRERVAH ALERVGLAEH
ADRWPRELSG GQQQRVSIAR AFVAQPRVLL LDEPFSALDA FTRKDLHRHL LALWEEVRPT
VLIVTHDVAE AVALADRAIV MRPRPGRLDD TIALSMRRPR DPAAATSEAA TRTILAALDH
SLRPRDASPA PELAGGSSF
|
|---|
| |