Gene Mpop_0344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_0344 
Symbol 
ID6313804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp365997 
End bp366866 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content67% 
IMG OID642649042 
ProductIntegrase catalytic region 
Protein accessionYP_001923057 
Protein GI188579612 
COG category[L] Replication, recombination and repair 
COG ID[COG2826] Transposase and inactivated derivatives, IS30 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.954448 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTCC TAGACGTCTC CGAGCGCCGC GCCTGTCGGG CGCTCGGGCA GCATCGCTCG 
ACGCAGCGCA AGGTGCCGCG GGGAAGAGAG GATGAGGCCG CGCTGACAGC CGACCTCGTG
GAACTGGCTC GCCAGTACGG GCGCTACGGC TACCGGAAGA TCGGTGCATT GCTGAAGGCG
GCGGGCTGGT TCGTCAACGA CAAGCGGGTC GAGCGGATCT GGCGGCGCGA GGGGCTGAAG
GTCCCGTCTC GGCAGCCCAA GCGCGGCCGC ATCTGGGACG GGGATGGTTC CTGCCTGCGA
TTGCGGGCGG AGCGTCGCGA TCACGTCTGG TCCTACGACT TTGTCGAAGC CCGCACGCAC
GAGGGCCGCA AGTTCCGGAT GCTGAACGTG GTCGATGAGT TCACGCGGGA GTGCCTGGCG
ATCCGCGTCG CACGCAAGCT GAAGGCGGCG GACGTGATCG ACGTGCTGTC CGACCTGTTC
ATCCTGCGCG GCGTGCCCGG CCATATCCGC TCGGACAACG GTCCGGAGTT CATCGCCAAG
TCCGTGCAGG CCTGGATCAC CGGTGTCGGC GCCAGAACAG CCTACATCGC ACCCGGCTCG
CCATGGGAGA ACGGTTACGT CGAGAGCTTC AACGCACGAC TACGGGACGA GCTTTTGAAC
GGTGAGATCT TCTACACGCT CAAGGAGGCG CAGATCGTGA TCGAGAGTTG GCGTCTACAC
TACAACAGCG TGCGCCCGCA CGCCTCGCTC GGCTACCGAC CACCGGCCCC GGAGGTGTTC
GTGCCGGCCT TCACCGCTTG GCCGGCTGCG CTCACCCGGT CGGCTCCGCC GGCCAAGCGA
CCCGTGGAGC AAAGGCCGAC CCTGCACTAA
 
Protein sequence
MNVLDVSERR ACRALGQHRS TQRKVPRGRE DEAALTADLV ELARQYGRYG YRKIGALLKA 
AGWFVNDKRV ERIWRREGLK VPSRQPKRGR IWDGDGSCLR LRAERRDHVW SYDFVEARTH
EGRKFRMLNV VDEFTRECLA IRVARKLKAA DVIDVLSDLF ILRGVPGHIR SDNGPEFIAK
SVQAWITGVG ARTAYIAPGS PWENGYVESF NARLRDELLN GEIFYTLKEA QIVIESWRLH
YNSVRPHASL GYRPPAPEVF VPAFTAWPAA LTRSAPPAKR PVEQRPTLH