Gene Mpop_0315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_0315 
Symbol 
ID6312618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp337533 
End bp340238 
Gene Length2706 bp 
Protein Length901 aa 
Translation table11 
GC content69% 
IMG OID642649016 
Productsignal transduction histidine kinase 
Protein accessionYP_001923031 
Protein GI188579586 
COG category[T] Signal transduction mechanisms 
COG ID[COG3920] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAGCG ATTTGCACAG CCTCTCGCGC GAGGAGCTTG AGGCGGAGGT CCTGCGATTG 
CGGGCGAGGC TGGCAGGGCA TCCCGACCAG GGGCGGGACC GCCAGCCGGT ATCCGATGCC
GATGTGCTGT TCTCCGCCGT CGACAAGACC GGCCTGCCGA TGATCCTCAC CGACCCCAAC
CAGGACGACG ACCCCATCGT CTTCACGAAC CGCGCCTTCC TCGACCTCAC GGGTTACGGG
GTCGACGAGG TCGTCGGTCG CAACTGCCGG TTTCTCCAGG GTCCGGACAC CGAGCACGAC
CACGTCGACG AGATCCGCGC CGCGTTGCGC GACAACCGCG ACCTCACCAT CGAGATCACC
AACCATCGCC GGGACGGCAC ACCCTTCGTC AACGCCCTGT TCATCGGACC CGTCTTCGAC
GGCGAGGGCC GCCTGCGCTA CCGCTTCGGC AGCCAAATCG ACGTCACCGA GGCACATCGC
AACCGGCGCC GTCTCGCCGA GAGCGATGCG CGCCAGCGCG CGATCTTCGA CAGCGCGAGC
GAGATGGCCA TCGTCGTCAC GGACCCCGCG GGCAAGGTGA CCGACTGGAA CGTCGGGGCC
GAGCGCATCC TGGGCTGGTC GGCCGAGGAG ATGCGCGGGC AGACCGTCGA CCGGATCTTC
ACGCCCGAGG ATCGGACGAC CGGTCAGATG AGGAAGGAGA TGGATGGCGT CCTGCGGGAC
GGCCATGCCG AGGACATGCG CTGGCATCTG CGCAAGGACG GCGGCCGGTT CTACGCGGTC
GGCGACATGA CCTCGCTGCG GGGGCTCGAT GGTACGCACC AGGGTTTCGT CAAGGCGTTC
AGCGACCGCA CGCAGGAGCG CAACGCCGCC ACGAAGGAAC AGGCCGACGC CGAGTTCATG
CGCAGCGTCC TGGCATCCTC CGCCGACTGC ATCAAGGTGC TCGACCTCGA CGGCGGCCTG
ACCTTCATGA GCGAGGGCGG CCAGAAGGTG ATGGAGGTCA GCGACTTCAA TCACATCAAG
GGCTGCCCAT GGCCGAGCTT CTGGAAGGGC CAGGGGAACG CCGATGCGCT CGCGGCCCTG
GCCACGGCCC GGGACGGCGG GATCGGCCAC TTCCAGGGGG GCGCGGACAC CTTCCTTGGC
AACGCCAAAT GGTGGGACGT CCAGGTGACG CCGATCTTCG GCCCTTACGG ACGACCGGAG
CGGATCCTGT CCGTGTCGCG CGACATCACC GAGCGGAAGA CGTTCGAGGA ACGTCTCGCG
GCGAGCGAGG CCCATTGGCG CGACCTGTTC GAGCGCCTGA GCGAGGGCTT CATCGTCGGT
GAGGTCGTGC GCGATCCCGC CGGTCGCATC ACGGATTGGC GCTACGTCGA CGTCAACTCC
GCCTGGGGCC GGCTCGTCGG CATCGCGTCG GACAGTGTCG TGGGGCGTAC GATCCGCGAG
GTGTTTCCGG GCATCGAGGA CGCCTGGGTC GATGAGTTCG CCGACGTGGT CGAGACCGCG
GAGCCGGTGA CGTTCGTCCG GCAGGTCGGC ACCCTGGCGC GGTGGTACGA GGGCCGGGCC
TTCCCGCTCG GCAGCGAACG CTTCGGCGTG ATCTTCCTGG AGGTGACGGA GAGGGTGCAG
GCCGACGCCC GGCGCAGCGG CCTCCTGGAG TTTGGGGAAC GGCTGCGGGG CGACATCGGC
ACCGACGCGA TAGCGATGGC GGCCGCCGCC ATCCTCGGGC GCGTGCTCGG CGTTGGCCGG
GTGGGTTACG GCACCGTTGG CTCGGACGGC GAGAGCTTCG TCGTGGAGGA GGACTGGACC
GCGACGGGTT TCCCGACGCT CGCCGGCCGC TATTGCATGG ACGATTACGG CCTCTACGCC
GAGGACCTCC GGCAGGGGCG GACGGTCGTC ATCGCCGACG TGCGCGAGGA CCCGCGTACC
GCCGCCTCCG CCGCGACCCT GGAGGCGGTC TCCGCGCGCA CGCTGGTCAA CGTGCCCATT
GTTGAGAAGG GCAGGACGGT GGCGGTGCTG TACGTGAACG ACGACCGTTC ACGCTCGTGG
GGGGAGCCGG AAGTCGCGTT CATCCGCCAG ATCGCCGAGC TGACCCGCCA AGCCGTCGAG
CGGCGGCGCG CGGAAGAGCG GCAGGACCTG CTGAACCACG AACTCTCCCA CCGCCTCAAG
AACACAATGG CGATGGTCGT GAGCATCGCG CACCAGACGC TGCGCTCCGT GTCGGAGCGC
GGACCGGTCG AGGCTTTCGA GAAGCGCATT CAGGCGTTGG CCTCGGCCCA CGACCTGTTG
CTGCGCAAGG ACTGGACGGC CGCGGACCTT CGGAGCGTTT GCCGGGAGGT TCTGGGCACC
GCGGCCGAGG CCCGCCGCTT CACGCTCGAT GGCCCCGACG TGGCGCTCGG CCCAAGTGCC
GCGCTGTCGG CGTCGCTGCT CCTCCATGAA CTGGCGACCA ACGCGGCCAA GTACGGCAGC
CTGTCCGGTG AGGAGGGCGC GGTTGAGGTG CGATGGTGGA TCGACGGCGA TGCGGGAGAG
CCGGGGTTGG TGCTGCGGTG GCGTGAGCAC GGCGGCCCTC CCGTGGTGGC CCCGACACGA
CGCGGCTTCG GATCGCGCCT GATCCGGACC GGTCTGGTGG GAACGGGCGA GGTCGACGTG
ACCTATCATA CCGAGGGGGT GGTGGCGGCG ATGCGTGCGC CACTGGTCGA GGTGCAGCGT
CTATGA
 
Protein sequence
MDSDLHSLSR EELEAEVLRL RARLAGHPDQ GRDRQPVSDA DVLFSAVDKT GLPMILTDPN 
QDDDPIVFTN RAFLDLTGYG VDEVVGRNCR FLQGPDTEHD HVDEIRAALR DNRDLTIEIT
NHRRDGTPFV NALFIGPVFD GEGRLRYRFG SQIDVTEAHR NRRRLAESDA RQRAIFDSAS
EMAIVVTDPA GKVTDWNVGA ERILGWSAEE MRGQTVDRIF TPEDRTTGQM RKEMDGVLRD
GHAEDMRWHL RKDGGRFYAV GDMTSLRGLD GTHQGFVKAF SDRTQERNAA TKEQADAEFM
RSVLASSADC IKVLDLDGGL TFMSEGGQKV MEVSDFNHIK GCPWPSFWKG QGNADALAAL
ATARDGGIGH FQGGADTFLG NAKWWDVQVT PIFGPYGRPE RILSVSRDIT ERKTFEERLA
ASEAHWRDLF ERLSEGFIVG EVVRDPAGRI TDWRYVDVNS AWGRLVGIAS DSVVGRTIRE
VFPGIEDAWV DEFADVVETA EPVTFVRQVG TLARWYEGRA FPLGSERFGV IFLEVTERVQ
ADARRSGLLE FGERLRGDIG TDAIAMAAAA ILGRVLGVGR VGYGTVGSDG ESFVVEEDWT
ATGFPTLAGR YCMDDYGLYA EDLRQGRTVV IADVREDPRT AASAATLEAV SARTLVNVPI
VEKGRTVAVL YVNDDRSRSW GEPEVAFIRQ IAELTRQAVE RRRAEERQDL LNHELSHRLK
NTMAMVVSIA HQTLRSVSER GPVEAFEKRI QALASAHDLL LRKDWTAADL RSVCREVLGT
AAEARRFTLD GPDVALGPSA ALSASLLLHE LATNAAKYGS LSGEEGAVEV RWWIDGDAGE
PGLVLRWREH GGPPVVAPTR RGFGSRLIRT GLVGTGEVDV TYHTEGVVAA MRAPLVEVQR
L