| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_0293 |
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| Symbol | |
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| ID | 6308742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | - |
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| Start bp | 309948 |
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| End bp | 312917 |
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| Gene Length | 2970 bp |
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| Protein Length | 989 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642648995 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_001923010 |
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| Protein GI | 188579565 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAACG GCCCCGAAGT GCACGGCGAC AAGACCGAGC GGCCCGAGAT CCGCGCCAAC
GGCCGGCAGG ATGCCGGCGG TCCGGTGGGT GGCCCGCAGC CGGGCTCCGG CGGCGCCTAC
TCGCAGGGCG CTAAGTCCGG CGGCCAGGCC GCGCCCGAGC CCTCGGGCAC CTTCGGCCTC
AAGGAAGCCC CGATCGCGCC CGCCACGATC ACGTTCGAGC TCGACGGCCA GCAGGTCGAG
GCGCAGCCCG GCGAGACGAT CTGGGCGGTG TCGAAGCGGC TGGGCACCCA CATCCCGCAT
CTCTGCCATA AGCCGGAGCC CGGCTATCGG CCGGACGGCA ACTGCCGCGC CTGCATGGTC
GAGATCGAGG GCGAGCGCGT GCTCGCCGCC TCGTGCAAGC GCACGCCCGC CATCGGCATG
AAGGTGAAGA CCGCGACCGA GCGCGCCACC AAGGCCCGCG CCATGGTGCT CGAACTGCTG
GTGGCCGACC AGCCCGAGCG CGCGACCTCG CACGACCCGT CCTCCCACTT CTGGGTGCAG
GCCGATTATC TCGACGTCTC GGAGAGCCGC TTCCCGGCCG CCGAGCGCTG GTCGAGCGAC
GTCAGCCACC CGGCCATGAG CGTCAATCTC GACGCCTGCA TCCAGTGCAA TCTCTGCGTC
CGAGCCTGCC GCGAAGTCCA GGTCAACGAC GTGATCGGCA TGGCCTACCG TTCGGCGGAC
TCCAAGGTCG TGTTCGACTT CGACGACCCG ATGGGCGCCT CGACCTGCGT CGCCTGCGGC
GAGTGCGTCC AGGCCTGTCC GACCGGCGCG CTGATGCCGT CAGCCTATCT CGACGCGAAC
CAGACCCGCA CGGTCTATCC CGACCGCGAG GTGAAGTCGC TTTGCCCCTA TTGCGGCGTC
GGCTGCCAGG TCTCCTACAA GGTCAAGGAC GAGAAAATCG TCTATGCCGA GGGCGTCAAC
GGCCCGGCCA ACCACAACCG CCTCTGCGTG AAGGGCCGCT TCGGTTTCGA CTACGTCCAC
CATCCCCACC GTCTGACGGT GCCGCTGATC CGCCTGGAGA ACGTCCCCAA GGACGCCAAC
GATCAGGTCG ATCCGGCCAA CCCCTGGACC CATTTCCGCG AGGCGACGTG GGAGGAGGCG
CTCGACCGCG CCGCGGGTGG CCTGAAGACG ATTCGCGATA CGAACGGGCG CAAGGCGCTT
GCGGGCTTCG GCTCGGCCAA GGGCTCGAAC GAGGAGGCTT ACCTCTTCCA GAAGCTCGTG
CGCCTGGGCT TCGGCACCAA CAACGTGGAT CACTGCACGC GGCTGTGCCA CGCCTCGTCG
GTGGCCGCCC TGATGGAGGG CCTGAACTCC GGCGCCGTGA CGGCGCCGTT CTCGGCGGCG
CTTGACGCCG AGGTGATCGT GGTGATCGGC GCCAACCCGA CCGTGAACCA TCCGGTCGCC
GCGACCTTCC TCAAGAACGC GGTGAAGCAG CGCGGCGCCA AGCTGATCAT CATGGACCCG
CGGCGCCAGT CGCTGTCGCG CCACGCTTAT AAGCACCTCG CCTTCCGCAA CGGCACCGAC
GTGGCGATGC TCAACGCGAT GCTGAACGTC ATTGTCGAGG AAAAGCTCTA CGATGAGCAG
TACATCGCCG GATACACCGA GAACTTCGAC GCGCTGAAGG AGAAGATCGT CGACTTCACC
CCGGAAAAGA TGGCGCCCGT GTGCGGCATC GACGCCGAGA CCCTGCGCGA GGTGGCGCGG
CTCTACGCCC GGGCCAAGTC CTCGATCATC TTCTGGGGCA TGGGCGTCAG CCAGCACGTC
CACGGCACCG ACAACTCGCG TTGCCTGATC GCGCTGGCGC TCATCACCGG CCAGATCGGC
CGTCCGGGCA CCGGCCTGCA CCCCTTGCGC GGCCAGAACA ACGTCCAGGG CGCCTCCGAC
GCCGGCCTGA TCCCGATGGT CTATCCGGAT TATCAGTCGG TCGAAAAGGC GGCCGTGCGC
GAGCTGTTCG AGGAGTTCTG GGGCCAGTCC CTCGATCCGC AGAAGGGCCT CACGGTCGTC
GAGATCATGC GCGCGATCCA CGCGGGCGAG ATCAAGGGCA TGTTCGTCGA GGGCGAGAAC
CCGGCGATGT CCGACCCCGA CCTCAACCAC GCCCGCCACG CGCTGGCGAT GCTCGACCAT
CTCGTGGTGC AGGACCTGTT CCTGACCGAG ACCGCCTTCC ACGCCGACGT GGTGCTGCCG
GCTTCCGCTT TCGCCGAGAA GGCCGGCAGC TTCACCAACA CCGACCGGCG CGTGCAGATC
GCCCAGCCGG TTGTCGCGCC GCCCGGCGAC GCGCGTCAGG ATTGGTGGAT CATCCAGGAG
CTGGCCAAGC GGATGGGCCT CGACTGGAAC TACAGCGGCC CGGCCGACAT CTTCGCCGAG
ATGGCGCAGG TGATGCCGTC CCTGAACAAC ATCACCTGGG AGCGGCTGGA GCGTGAGGGC
GCGGTGACCT ACCCGGTCGA TGCCCCGGAC CAACCCGGCA ACGAGATCAT CTTCTACGCC
GGCTTCCCCA CCGAGAGCGG GCGCGCCAAG ATCGTCCCCG CGGCGATCGT GCCGCCGGAC
GAGGTGCCGG ACGCCGAGTT CCCGATGGTG CTCTCGACAG GCCGCGTGCT GGAGCACTGG
CACACCGGTT CGATGACCCG GCGCGCGGGC GTGCTCGACG CTCTGGAGCC CGAGGCGGTC
GCCTTCATGG CGCCGAAGGA ACTCTATCGC CTGGGACTGC GTCCCGGCGG CGCGATGCGG
CTGGAAACGC GGCGCGGTGC CGTCGAGCTG AAGGTGCGCT CCGACCGCGA CGTACCGGCG
GGCATGATCT TCATGCCGTT CTGCTACGCC GAGGCCGCCG CCAATCTCCT GACCAACCCG
GCGCTCGACC CACTCGGCAA GATCCCCGAG TTCAAGTTCT GCGCCGCCCG CGTCGCCCCC
GTGGAGGCCG CACCGATGGC CGCTGAGTGA
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| Protein sequence | MSNGPEVHGD KTERPEIRAN GRQDAGGPVG GPQPGSGGAY SQGAKSGGQA APEPSGTFGL
KEAPIAPATI TFELDGQQVE AQPGETIWAV SKRLGTHIPH LCHKPEPGYR PDGNCRACMV
EIEGERVLAA SCKRTPAIGM KVKTATERAT KARAMVLELL VADQPERATS HDPSSHFWVQ
ADYLDVSESR FPAAERWSSD VSHPAMSVNL DACIQCNLCV RACREVQVND VIGMAYRSAD
SKVVFDFDDP MGASTCVACG ECVQACPTGA LMPSAYLDAN QTRTVYPDRE VKSLCPYCGV
GCQVSYKVKD EKIVYAEGVN GPANHNRLCV KGRFGFDYVH HPHRLTVPLI RLENVPKDAN
DQVDPANPWT HFREATWEEA LDRAAGGLKT IRDTNGRKAL AGFGSAKGSN EEAYLFQKLV
RLGFGTNNVD HCTRLCHASS VAALMEGLNS GAVTAPFSAA LDAEVIVVIG ANPTVNHPVA
ATFLKNAVKQ RGAKLIIMDP RRQSLSRHAY KHLAFRNGTD VAMLNAMLNV IVEEKLYDEQ
YIAGYTENFD ALKEKIVDFT PEKMAPVCGI DAETLREVAR LYARAKSSII FWGMGVSQHV
HGTDNSRCLI ALALITGQIG RPGTGLHPLR GQNNVQGASD AGLIPMVYPD YQSVEKAAVR
ELFEEFWGQS LDPQKGLTVV EIMRAIHAGE IKGMFVEGEN PAMSDPDLNH ARHALAMLDH
LVVQDLFLTE TAFHADVVLP ASAFAEKAGS FTNTDRRVQI AQPVVAPPGD ARQDWWIIQE
LAKRMGLDWN YSGPADIFAE MAQVMPSLNN ITWERLEREG AVTYPVDAPD QPGNEIIFYA
GFPTESGRAK IVPAAIVPPD EVPDAEFPMV LSTGRVLEHW HTGSMTRRAG VLDALEPEAV
AFMAPKELYR LGLRPGGAMR LETRRGAVEL KVRSDRDVPA GMIFMPFCYA EAAANLLTNP
ALDPLGKIPE FKFCAARVAP VEAAPMAAE
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