| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_0286 |
|---|
| Symbol | |
|---|
| ID | 6308947 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 304888 |
|---|
| End bp | 306030 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 642648991 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001923006 |
|---|
| Protein GI | 188579561 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4671] Predicted glycosyl transferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.17774 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAC CCATCGCGTT CTTCGTCCAC CACCAGGGCC GCGGCCACGC CCAGCGCACC
ATGGCGGTGG CCGCCGAGTT CGCCCGCGAC CGCCCGGTCT CGGTGCTGAC CGCCGGCCCG
CACCTGTTCG ACGGCTTCTC ACGCGACATC GAGATCGTGA CGCTGCCGAA CATGATCGGC
GCAGCGGTGC CGACTCCGCG CCTCTATGCC GAGCCGACGC CGCCGGTGAT GCATTGCGTG
CCGCTGGGCC TTCCCGAGAT GCGGCGGACC ATGCGGACCA TCCTCGACCA TCTCGACGCC
CGCGAGATCG GGCTATTCGT GGTCGACGTC TCCGCCGAGA TCGCGCTGCT CGCACGCATC
GCCAGCGTGC CCGCCGTGCA GATCCGCATG CACGGCGACC GGGGCGACAT CGGCCATCTC
GGCGCCTACG AAGCCTGCGT CGGCATGCTC GCGCCCTTCG ACGAGCGGCT GGAGCAGGAC
GACTACCCGG CGCCTCTGCG GGCCAAGACG TTCTACAGCG GCGGCCTGTG CACCAGCGTC
GATCGCGTGC CGGAGCGGGC CGAGGCGCGC GCCCGGCTCG GCCTCGACCC GGACCGCGAA
ATCATCGTGG CGGTCACCGG CGGCGGGGGC AGCGGCACGC CCTACGCGCC GCTCACCGTC
GCCGCCCGCG CCGCGCCCGA GGCCCTGTGG CTGACGCTCG GGCCGACCCA CCGCGAGGGC
CACGAGACCG ACTTCGCCAA CCTGCGCGAA CTCGGCTGGG TGCCGTCCGT GACCGACTAT
CTGGCGGCCG CCGACATCAT CGTGGCCTCG GCGGGCGACA ACACCGTGCA CGAGGTCGCC
CGCGTCGGCG GGCGCCTCAT CGTCATGCCC GAATGGCGCT ATTTCGGCGA GCAGGCCCGC
AAGGCCGAGG CGCTGGTGCG CCTGGGCGCC GCGGTCCAAG CCCCGCAATG GCCCGGCGAC
CTTCAGGGCT GGCGCGATCT GCTGGCCCGC GCCCGTGGTC TCGACGGCGG CATCCTGCGC
AGCCTCTACG CCCCCGACGC CGCCGCGCGC GCCGCCGGCT GGCTCGAAGG GCTGACCGAC
GAGCTGTGGC AGGGCGCCGC CCAAGACGCG CCCGCCCCGC TGCGCGTCGT CGCGACCCAC
TGA
|
|---|
| Protein sequence | MKKPIAFFVH HQGRGHAQRT MAVAAEFARD RPVSVLTAGP HLFDGFSRDI EIVTLPNMIG
AAVPTPRLYA EPTPPVMHCV PLGLPEMRRT MRTILDHLDA REIGLFVVDV SAEIALLARI
ASVPAVQIRM HGDRGDIGHL GAYEACVGML APFDERLEQD DYPAPLRAKT FYSGGLCTSV
DRVPERAEAR ARLGLDPDRE IIVAVTGGGG SGTPYAPLTV AARAAPEALW LTLGPTHREG
HETDFANLRE LGWVPSVTDY LAAADIIVAS AGDNTVHEVA RVGGRLIVMP EWRYFGEQAR
KAEALVRLGA AVQAPQWPGD LQGWRDLLAR ARGLDGGILR SLYAPDAAAR AAGWLEGLTD
ELWQGAAQDA PAPLRVVATH
|
|---|
| |