| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_0277 |
|---|
| Symbol | |
|---|
| ID | 6313231 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 296347 |
|---|
| End bp | 296847 |
|---|
| Gene Length | 501 bp |
|---|
| Protein Length | 166 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 642648982 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001922997 |
|---|
| Protein GI | 188579552 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCCGATC TGCGCGCACG GCTGGCGGAG GCGCCGGACT TCGACATCGT GTTCGTCGTG
GCCGGCGTCG CCACGCAGGC TGGCACGCCC GCGGCCCTGC TGCCGCGGGA CCTCGTCGGC
GCGGTGTTCC AGACCAATGC GGTGAGTCCG GTTCGATGCG CCGAGGCCTT TCATCGCCGC
GTGGCGCCGG GCGGGCTGAT CGTGCTGATG AGTTCGAAGC TTGGCTCGGT GTCGCTGAAC
CGGGGCGGCG GAAGGAGCAG CTACCGCGCG AGCAAGGCGG CGCTCAACAC CCTCGCGCGC
TCCTTCGCCG GCCAGCACAA GGGAGCGGAT TGGGGTGTCG TGCTCATGCA TCCCGGCTGG
GTGCGCACCG ATCTCGGCGG GCGACGCGCC ACCCTCGATG TCGAGACGAG CGCGCACGGC
ATGGTCGGCG TGCTGGAAGC CCGACTCGGG CAGCGCGGCT GCGTCTTCCT CGATCATGCC
GGAGAGACGG TGCCGTGGTG A
|
|---|
| Protein sequence | MADLRARLAE APDFDIVFVV AGVATQAGTP AALLPRDLVG AVFQTNAVSP VRCAEAFHRR
VAPGGLIVLM SSKLGSVSLN RGGGRSSYRA SKAALNTLAR SFAGQHKGAD WGVVLMHPGW
VRTDLGGRRA TLDVETSAHG MVGVLEARLG QRGCVFLDHA GETVPW
|
|---|
| |