| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_0271 |
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| Symbol | |
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| ID | 6309518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | + |
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| Start bp | 283677 |
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| End bp | 285050 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642648976 |
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| Product | type I secretion membrane fusion protein, HlyD family |
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| Protein accession | YP_001922991 |
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| Protein GI | 188579546 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACGC CGTCTGCCCC GCTTCCGATC CCGTCGCCCG CCGCTTCCCC GACGTCACGG
GCTCGGGGCA GCGAGGATAG CGCCGTCGCT CCGATCGCGT GGCAGCGCTA CGCGATCGCC
GGCTACGCCC TCATCGTGGC CGCCTTCGGT GTCGCTGGTG CCTGGGCAGC CACCGTACGC
CTGGATCGCG CCGTCATCAG CACCGGCGTC ATCGTTGCGG AAAGCAGCCG CAAAGTCGTC
CAGCACTTCG AGGGCGGCAT GGTGCAGGCG GTGCTGGTGC GGGATGGACA GACGGTCCGC
GCGGGCGACG TCCTCCTGCG GATCGATCCC GTCCAGTCCC AGGCGAGCGC GGACCTGTTC
CGCAATCAAC TCGACGCCGC TCTCGTCCTA GAGGCGCGGC TGCGCGCGGA GCAGGCGCAG
TCCGACGACC TGCAATTGCC CGCCGACCTC GCCGCCCGGC GCGACGAGCC CGCCGTCGCG
CGCATGATCA GCGATCAGGC CGGGCAGTTG GTCGAACGGC GGACGACGCT CAAGGGTCAG
CTCGCCCTCA TCGAGGCCAA GGTCACCCAG CTGCGGACGG AGATCTCCGG CCTCGCCGTC
GAGAAATCCT CGGTCGAGCA GCAGGTTGGC TTCATCCGGC AGGAGCTGGA GGGCCTGCGC
AGCCTGCACG AGCGGAATCT GATCCCCCTG TCACGCCTTC TCGTGATGGA GCGGGAGCGC
ACCCGGCTGG AGGGCGTGAT CGGACGCTCG GTGGCCGAAA GGGCCAAGGC CGAGAACGCC
ATCAGCGAGG CCGGGCTGCA GATCACCCAA TTGAAGCAGA AGCTTCAGGA GACGGTCACC
GGCCAGCTTC TCGAGACGCG GCAGAGAATC GGCGAACTGC GCGAAAAGCT CGTCGTCGCG
CAGGACGTGT TCCGACGCCA CGAGATCCGC GCCTCTCACG ACGGCGTCAT CCAGGCGCTC
AAGGTCGTCG CGATCGGGCA GGTCGTCCGC TCGGGCGAGC CGCTGATGGA GATCGTCCCG
ACCGCGGACC GGCTGGTGGT CAACGTACAA TTCTCGCCCA ACGACCTCGA AGCCGTCCAT
GCCGGCATGC GGGCGGAGAT CAAGTTTCCG ACCTTCCAGG CGCGCCGGAC GCCCGCCGTC
TTCGGAACGC TCACGGTGGT GTCGCGGGAC CGTCTCGTGG ACGAGGGCAC GAAGCAGGCC
TACTTCGCCG GTACCGTCGA GATCGACGAG CACCATCTTC CGGCCGACGT CAGGCACCGC
CTTCTCGCCG GACTGCCGGC TGAGGTGGTG GTCTCGGCCG GGGAGCGCAC GGCCCTCGAA
TATCTGTTTG CTCCCTTCTT CGACGCGATG GGACGCGCCT TCCATGAACG CTAG
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| Protein sequence | MSTPSAPLPI PSPAASPTSR ARGSEDSAVA PIAWQRYAIA GYALIVAAFG VAGAWAATVR
LDRAVISTGV IVAESSRKVV QHFEGGMVQA VLVRDGQTVR AGDVLLRIDP VQSQASADLF
RNQLDAALVL EARLRAEQAQ SDDLQLPADL AARRDEPAVA RMISDQAGQL VERRTTLKGQ
LALIEAKVTQ LRTEISGLAV EKSSVEQQVG FIRQELEGLR SLHERNLIPL SRLLVMERER
TRLEGVIGRS VAERAKAENA ISEAGLQITQ LKQKLQETVT GQLLETRQRI GELREKLVVA
QDVFRRHEIR ASHDGVIQAL KVVAIGQVVR SGEPLMEIVP TADRLVVNVQ FSPNDLEAVH
AGMRAEIKFP TFQARRTPAV FGTLTVVSRD RLVDEGTKQA YFAGTVEIDE HHLPADVRHR
LLAGLPAEVV VSAGERTALE YLFAPFFDAM GRAFHER
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