Gene Mpop_0270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_0270 
Symbol 
ID6309517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp281910 
End bp283673 
Gene Length1764 bp 
Protein Length587 aa 
Translation table11 
GC content69% 
IMG OID642648975 
Producttype I secretion system ATPase 
Protein accessionYP_001922990 
Protein GI188579545 
COG category[R] General function prediction only 
COG ID[COG4618] ABC-type protease/lipase transport system, ATPase and permease components 
TIGRFAM ID[TIGR01842] type I secretion system ABC transporter, PrtD family 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACC CTCTCGCCGG GTCCGTCCTG AAGGACGGGC TGCGTTCGAT CCGTCCCGTT 
CTGGTGACGG TTTTCGTCTT CGCCTTCTTC ACGAACCTGC TCCTGTTCGC CGGCCCGCTC
TACATGCTGC AGGTCTACGA TCGCGTTCTT CTGAGCCGGA ACGAAGCGAC GCTGTTCGGA
GTCACCGCGA TCGCGGCCTT CGCGCTCGCA GTCTATGCCG CTCTCGAAAT GCTGCGTTCG
CGCCTGCTGG TGCGGGGCGG GATGATCTTC GATCGGAAGG TGGCCGGACC GGTCTTCGAG
ATCGTTCACA GGGCCGCTCT GCTCGCGCCG CGGGCCGGGC ACGAAGCAGC CTTGCGCGAC
GTCGATGTCC TGCGCGAATT CCTGACGGGC GGGGCCATTC TGGCGTTCTG CGACCTGCCC
TGGGCCTCGC TGTTCCTGAT CGCGTGCTTC ATCCTCCATC CGTGGTTCGG CTGGATGGCC
TTGCTCGGGG GCGGCACGCT CTTGGGGCTG ACGCTCCTCA CCGATCTCAC GACGCGGCGG
CCTCTCGACG TGGCGAGCCA AGCCGCACGA GAGGCGGGCG AGCAGGCCCG CGCGACCGTC
CGCGGGGGCG AGGTCCTGCG AGCCATGGGC ATGCTGGGCC CCCTGCGGTC CCGTTGGCGA
AGGCGTCACG ACGAGGCGAT CCTGCTGCAA GCCCGGGCGA GCGACCGCGC CGGCCTCATC
GCCGCAGCGA CGAAGTTCAC GCGCATGTTC CTGCAGACGA TGGTCCTCGG TGTCGGCGCC
TACCTCGCCA TCCATGGCGA GATCTCGGCC GGCTCGATGA TCGCGGCCTC GATCATCATG
GGGCGGACGC TGGCGCCCAT CGAGGCGGTC GTCGGACACT GGAAGAGCTT CACGGCGGCG
CGGAGCAGCC ACGCCCGGCT GACGGACATC GTCGCGCGCA TCGGGCTCGA GCCGGAGCGC
GTGATGCTGC CGCGCCCGCG CGGTCTGATC GAGACCGAGA ATCTGGTCGT CGCAGCGCCG
GGCTCGTCGC GAACGATCCT CCAAGACGTC AGCGTGCGGT TGGAGCCCGG CAGCGTCGTC
GGGATCATCG GTCCGAGTGC GGCCGGGAAA TCGACGCTGG TCCGCGCGAT CACGGGTGTC
TGGCCGATCG TTTCCGGTGC CGTGCGCATC GATGGAGCCG ACCTCCGGCA CTGGGATCCT
CAGGCGCTCG GGCGGCATCT CGGATATCTG CCGCAGGATG TCGAATTGTT CGATGGCACG
GTGGCGCAGA ACATCGCGCG CTTCGACGTT CAGGACGACG CCGCCATCGT CTCGGTTGCG
CAACGCGCGG GCTGCCACGA CCTGATCCAG GCCCTGCCCG ACGGCTACAA TACCCGGATC
GGCACGGGCG GGCACGGTCT CTCCGGCGGC CAGCGTCAGC GCATCGCCCT GGCGCGCGCG
ATGTACGGGG ATCCGAGCCT GATCGTCCTC GACGAGCCGA ATGCCAGTCT CGACCAAGCC
GGCGAAGCCG CGCTGATGCG GGCGGTGGCG GACCTTCGAG AGCGTGGGAC GACCGTCGTC
ATCGTCACGC ACAAGGTGAG CCTGCTGGCG GGCGCCGACC TGATCCTGAT GCTGGATGGC
GGAACGCTGC GGGCCTCGGG CCCGGCGGAC CAGATCCTCG CCCACGTCTC CGGTCCCCGT
CCGGTCCCGG CGCTGGTCGC GACCGCCGGC CGGGCCATGC CCGAGACCGA GAGGGTGTCC
GAAGTCCAGC GCAACGCGGG CTGA
 
Protein sequence
MSDPLAGSVL KDGLRSIRPV LVTVFVFAFF TNLLLFAGPL YMLQVYDRVL LSRNEATLFG 
VTAIAAFALA VYAALEMLRS RLLVRGGMIF DRKVAGPVFE IVHRAALLAP RAGHEAALRD
VDVLREFLTG GAILAFCDLP WASLFLIACF ILHPWFGWMA LLGGGTLLGL TLLTDLTTRR
PLDVASQAAR EAGEQARATV RGGEVLRAMG MLGPLRSRWR RRHDEAILLQ ARASDRAGLI
AAATKFTRMF LQTMVLGVGA YLAIHGEISA GSMIAASIIM GRTLAPIEAV VGHWKSFTAA
RSSHARLTDI VARIGLEPER VMLPRPRGLI ETENLVVAAP GSSRTILQDV SVRLEPGSVV
GIIGPSAAGK STLVRAITGV WPIVSGAVRI DGADLRHWDP QALGRHLGYL PQDVELFDGT
VAQNIARFDV QDDAAIVSVA QRAGCHDLIQ ALPDGYNTRI GTGGHGLSGG QRQRIALARA
MYGDPSLIVL DEPNASLDQA GEAALMRAVA DLRERGTTVV IVTHKVSLLA GADLILMLDG
GTLRASGPAD QILAHVSGPR PVPALVATAG RAMPETERVS EVQRNAG