Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_0270 |
Symbol | |
ID | 6309517 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | + |
Start bp | 281910 |
End bp | 283673 |
Gene Length | 1764 bp |
Protein Length | 587 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642648975 |
Product | type I secretion system ATPase |
Protein accession | YP_001922990 |
Protein GI | 188579545 |
COG category | [R] General function prediction only |
COG ID | [COG4618] ABC-type protease/lipase transport system, ATPase and permease components |
TIGRFAM ID | [TIGR01842] type I secretion system ABC transporter, PrtD family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACC CTCTCGCCGG GTCCGTCCTG AAGGACGGGC TGCGTTCGAT CCGTCCCGTT CTGGTGACGG TTTTCGTCTT CGCCTTCTTC ACGAACCTGC TCCTGTTCGC CGGCCCGCTC TACATGCTGC AGGTCTACGA TCGCGTTCTT CTGAGCCGGA ACGAAGCGAC GCTGTTCGGA GTCACCGCGA TCGCGGCCTT CGCGCTCGCA GTCTATGCCG CTCTCGAAAT GCTGCGTTCG CGCCTGCTGG TGCGGGGCGG GATGATCTTC GATCGGAAGG TGGCCGGACC GGTCTTCGAG ATCGTTCACA GGGCCGCTCT GCTCGCGCCG CGGGCCGGGC ACGAAGCAGC CTTGCGCGAC GTCGATGTCC TGCGCGAATT CCTGACGGGC GGGGCCATTC TGGCGTTCTG CGACCTGCCC TGGGCCTCGC TGTTCCTGAT CGCGTGCTTC ATCCTCCATC CGTGGTTCGG CTGGATGGCC TTGCTCGGGG GCGGCACGCT CTTGGGGCTG ACGCTCCTCA CCGATCTCAC GACGCGGCGG CCTCTCGACG TGGCGAGCCA AGCCGCACGA GAGGCGGGCG AGCAGGCCCG CGCGACCGTC CGCGGGGGCG AGGTCCTGCG AGCCATGGGC ATGCTGGGCC CCCTGCGGTC CCGTTGGCGA AGGCGTCACG ACGAGGCGAT CCTGCTGCAA GCCCGGGCGA GCGACCGCGC CGGCCTCATC GCCGCAGCGA CGAAGTTCAC GCGCATGTTC CTGCAGACGA TGGTCCTCGG TGTCGGCGCC TACCTCGCCA TCCATGGCGA GATCTCGGCC GGCTCGATGA TCGCGGCCTC GATCATCATG GGGCGGACGC TGGCGCCCAT CGAGGCGGTC GTCGGACACT GGAAGAGCTT CACGGCGGCG CGGAGCAGCC ACGCCCGGCT GACGGACATC GTCGCGCGCA TCGGGCTCGA GCCGGAGCGC GTGATGCTGC CGCGCCCGCG CGGTCTGATC GAGACCGAGA ATCTGGTCGT CGCAGCGCCG GGCTCGTCGC GAACGATCCT CCAAGACGTC AGCGTGCGGT TGGAGCCCGG CAGCGTCGTC GGGATCATCG GTCCGAGTGC GGCCGGGAAA TCGACGCTGG TCCGCGCGAT CACGGGTGTC TGGCCGATCG TTTCCGGTGC CGTGCGCATC GATGGAGCCG ACCTCCGGCA CTGGGATCCT CAGGCGCTCG GGCGGCATCT CGGATATCTG CCGCAGGATG TCGAATTGTT CGATGGCACG GTGGCGCAGA ACATCGCGCG CTTCGACGTT CAGGACGACG CCGCCATCGT CTCGGTTGCG CAACGCGCGG GCTGCCACGA CCTGATCCAG GCCCTGCCCG ACGGCTACAA TACCCGGATC GGCACGGGCG GGCACGGTCT CTCCGGCGGC CAGCGTCAGC GCATCGCCCT GGCGCGCGCG ATGTACGGGG ATCCGAGCCT GATCGTCCTC GACGAGCCGA ATGCCAGTCT CGACCAAGCC GGCGAAGCCG CGCTGATGCG GGCGGTGGCG GACCTTCGAG AGCGTGGGAC GACCGTCGTC ATCGTCACGC ACAAGGTGAG CCTGCTGGCG GGCGCCGACC TGATCCTGAT GCTGGATGGC GGAACGCTGC GGGCCTCGGG CCCGGCGGAC CAGATCCTCG CCCACGTCTC CGGTCCCCGT CCGGTCCCGG CGCTGGTCGC GACCGCCGGC CGGGCCATGC CCGAGACCGA GAGGGTGTCC GAAGTCCAGC GCAACGCGGG CTGA
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Protein sequence | MSDPLAGSVL KDGLRSIRPV LVTVFVFAFF TNLLLFAGPL YMLQVYDRVL LSRNEATLFG VTAIAAFALA VYAALEMLRS RLLVRGGMIF DRKVAGPVFE IVHRAALLAP RAGHEAALRD VDVLREFLTG GAILAFCDLP WASLFLIACF ILHPWFGWMA LLGGGTLLGL TLLTDLTTRR PLDVASQAAR EAGEQARATV RGGEVLRAMG MLGPLRSRWR RRHDEAILLQ ARASDRAGLI AAATKFTRMF LQTMVLGVGA YLAIHGEISA GSMIAASIIM GRTLAPIEAV VGHWKSFTAA RSSHARLTDI VARIGLEPER VMLPRPRGLI ETENLVVAAP GSSRTILQDV SVRLEPGSVV GIIGPSAAGK STLVRAITGV WPIVSGAVRI DGADLRHWDP QALGRHLGYL PQDVELFDGT VAQNIARFDV QDDAAIVSVA QRAGCHDLIQ ALPDGYNTRI GTGGHGLSGG QRQRIALARA MYGDPSLIVL DEPNASLDQA GEAALMRAVA DLRERGTTVV IVTHKVSLLA GADLILMLDG GTLRASGPAD QILAHVSGPR PVPALVATAG RAMPETERVS EVQRNAG
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