| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_0249 |
|---|
| Symbol | |
|---|
| ID | 6313364 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 255645 |
|---|
| End bp | 256910 |
|---|
| Gene Length | 1266 bp |
|---|
| Protein Length | 421 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642648954 |
|---|
| Product | Protein involved in cellulose biosynthesis (CelD)-like protein |
|---|
| Protein accession | YP_001922969 |
|---|
| Protein GI | 188579524 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG5653] Protein involved in cellulose biosynthesis (CelD) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.801675 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGATTT CTGGACATAC AGCGAAATCG GGCGCCGCGC TAATCCCGGA TGCGGATGAC
CGTGATTTGA AGAACGGCCG CCGGAGCGCG TTTCCGGCGG TTCAACTCGC GCGCGCGCCC
GACGCTTGGT CCGATCCGGC CCTGGCGGGC GCCGTGGTGA CGGTGTTTCC GAGCGTCGAC
ACCGCCGAGA GCGTCTGGCG CGAGACCGCC GCGACAGGCG CCTGCACCGT GTTTCAATGC
TTCGAGTGGC TGGCCACGTG GCGCAGGACC GCCGGTGCGT CGGAGCCGCT CAGCGATCAG
ATCGTCCATG TCTCGAGCGA GGCGGGACAG ACGCTGATGC TGCTTCCGCT GGCGATACGC
CGGAACGCCT ACGGACGCAG TCTCGAGTTC CTGGGCGGAG ATCTCACCGA CTACAACATG
CCGATCCTCG GCGCGGGGTT CTCGCCCGGC CCCCGGGATG CCGAGCGGCT CTGGGCGGCC
ATCCTCGACG TGTTGCCGCC GGTCGATTTC GTCCGCCTGC GGCGAATGCC TCTCGTCTTC
GACGGGATCG CCAATCCGTT CGCCGGACTG GCGGGATCGC GGCACGCCAT CGATGCCTAC
GGCGCGAACT TGCCCCCGAC CTTCAAGGAC TTCACGACGC GAAGCCCGAG CTTCTTCAAC
AAGAACAGCC AGCGCCGCCG TCGGCTGGCC AAGGAGGGCA CGGTCCGGTT CGCCGTCGCG
CAGGATCCGG CGGAGCGGGT CGCCCTGACG CGCTTCGTGA TCGAGCAGAA GTCGCAATGG
CAGCGCGACA CCGGCCAGAT GGACACGTTC GCGGCACCGG AGCGGCTTGC CTTCTACACG
ACCCTGGCCG GCCTGCCGTT CGAGGAGGGA GGGGTCGTCC CCGTCGGATT GTGGGTCGGG
TCGGAACTCG TCGCCGGCAT CTGGGGAACG GTGTTCCGCG GACGCTTCGC CGTCATCGTC
GCCGCCTATC ACCAAGATTG GGCCAAGTTC TCCGTCGCGC GGCTCTTGAT GGAGAGTGCG
GTTGAGATGT GTATCGCACG TGACGATGTC GAAATCTTCG ATTTGACCGT GGGCGACGAG
GGCTACAAGA CAGACTGGTC GGACCATAGC CTGCCCCTGC ACGAGGTTAT CGCGCCGCAC
TCGCTCCGCG GCCGGATATT TATGGCCTAT TGGCACCTTC GCGGACGGGC GAAGACTGTG
CCGTGGCTGC GCGATGCCGT TCGCTCGGGC ATGCGCTTGG CTCAGCGCGT CTCAAAACGG
GACTAA
|
|---|
| Protein sequence | MQISGHTAKS GAALIPDADD RDLKNGRRSA FPAVQLARAP DAWSDPALAG AVVTVFPSVD
TAESVWRETA ATGACTVFQC FEWLATWRRT AGASEPLSDQ IVHVSSEAGQ TLMLLPLAIR
RNAYGRSLEF LGGDLTDYNM PILGAGFSPG PRDAERLWAA ILDVLPPVDF VRLRRMPLVF
DGIANPFAGL AGSRHAIDAY GANLPPTFKD FTTRSPSFFN KNSQRRRRLA KEGTVRFAVA
QDPAERVALT RFVIEQKSQW QRDTGQMDTF AAPERLAFYT TLAGLPFEEG GVVPVGLWVG
SELVAGIWGT VFRGRFAVIV AAYHQDWAKF SVARLLMESA VEMCIARDDV EIFDLTVGDE
GYKTDWSDHS LPLHEVIAPH SLRGRIFMAY WHLRGRAKTV PWLRDAVRSG MRLAQRVSKR
D
|
|---|
| |