| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_0238 |
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| Symbol | |
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| ID | 6313492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | - |
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| Start bp | 244856 |
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| End bp | 245803 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642648944 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_001922959 |
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| Protein GI | 188579514 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.187754 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCGGC TTCTCGCCCT CTCGTTCCGC CTTCTCGTCA CCCTCGGTAT GGTCGCCGCC
GCCATCGTCG TCGGGCTGGC CCTGTGGGAC TACTACATGG AGGCCCCCTG GACCCGGGAC
GGGCGGGTGC GGGCCGACGT GGTTCAGGTG GCCCCCGACG TCTCCGGCCT CGTCACCGAA
GTGCTGATCG CGGACAACCA AGTGGTCAAG CAAGGCGACG TCTTGTTCCG CATCGACCCC
GACCGCTTCG CGCTGGCCCT GCGGCAGGCC GAGGCGGTGG TCGAGGGCAA GAAGGCGAGC
GCCGTGCAGG CCGCGGCGGA CTACGCCCGT TACCTGAAGC TCAGCGACGC CGCGGCGTCC
CAGCAACGGG TCGAGGCGGC GCAGGCGGCC GACCTCGAGG CCAAGGCGGC CTACGGCCAA
GCGATGGCCG ACCGCGATCT CGCCAAGCTC AATCTCGACC GCTCCGCCGT GAAGGCCTCG
GTCAATGGCC GCATCACCAA TATGGGGCTG CGGCCCGGCA CCTACGTCTC GACCGGCCAC
GGCGTCATGG CGCTCATCGA CAGCGACACC CTGCGGGTGG AGGGTTACTT CGAAGAAACC
AAGCTGCCGC GCATCCATGT GGGCGACAGG GCCAGCATCC GCTTGATGGG CGAGAAGGAG
ACGCTGTCCG GTCACGTCGA GAGTTTTGCG GGCGGCATCG AGGACCGCGA GCGGACGGCG
GGCTCGAACC TGCTCGCGAG CGTCAACCCG ACCTTCGCCT GGGTCCGGCT CGCCCAGCGC
ATCCCGGTGC GGATCAAGCT CGACGGCGTT CCGGACCAGA CGCGGCTGGT CGCGGGCCGC
ACCGCCACGG TCGCGGTCGA ACCCAATGGC GAGACCCCGC ATTTCAGCCT GTCCGGTGCT
TGGCGGGGAG CCCCGGACCC CGCGCCCCGG GGCGCAGCCA CCCGTTGA
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| Protein sequence | MSRLLALSFR LLVTLGMVAA AIVVGLALWD YYMEAPWTRD GRVRADVVQV APDVSGLVTE
VLIADNQVVK QGDVLFRIDP DRFALALRQA EAVVEGKKAS AVQAAADYAR YLKLSDAAAS
QQRVEAAQAA DLEAKAAYGQ AMADRDLAKL NLDRSAVKAS VNGRITNMGL RPGTYVSTGH
GVMALIDSDT LRVEGYFEET KLPRIHVGDR ASIRLMGEKE TLSGHVESFA GGIEDRERTA
GSNLLASVNP TFAWVRLAQR IPVRIKLDGV PDQTRLVAGR TATVAVEPNG ETPHFSLSGA
WRGAPDPAPR GAATR
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