Gene Mpop_0213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_0213 
Symbol 
ID6312142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp221498 
End bp222550 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content70% 
IMG OID642648921 
Producthypothetical protein 
Protein accessionYP_001922936 
Protein GI188579491 
COG category[S] Function unknown 
COG ID[COG2855] Predicted membrane protein 
TIGRFAM ID[TIGR00698] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGGCGAC TGCATCTCCC GCACCGGATA TCGCCGCTCG CGGCGCTGGG TCCCGGCATT 
GCGCTCTGCC TCGCGCTGAC GCTCGTTTCG ATCGGCCTTC AGCGTCTCGA AGAGGACGTC
TTCGGGCATC CCTATGTCGA GGCGCTGGTG ATCGCCATCC TACTCGGCAT GGCGATGCGC
ACGCTCTGGC AACCGGGCCC GCTCTGGCGC TCGGGCATCG CCTTCAGCGC CAAGCAACTG
CTCGAAGTCG CGGTGATGCT GCTCGGCGCA TCGATCAGCT TCGCGGCGAT CCTCGCCTCC
GGCCCGGTGC TGCTCGCGGC CATCGTCGCC ACGGTCGCGG TCACGATCGC CGCGAGCTTC
GCCATCAGCC GCCTGCTCGG GCTCGCCGTG CGGATGTCGA TCCTGATCGC CTGCGGCAAC
GCGATCTGCG GCAACTCGGC GATCGCCGCG GTCGCCCCCG TCATCGGTGC CGGCAGCGAC
GACATCGCCT CCTCGATTTC CTTCACGGCG ATCCTCGGCG TGCTGATGGT GCTCGGCCTG
CCGCTGCTGA TCCCGCTGCT CGGTCTCAGC GCCGGCCAGT ACGGCATTCT CGCCGGGCTG
ACGGTCTACG CCGTGCCGCA GGTTCTCGCC GCTACCGTCC CGGCCGGCCT CGTCGCCACC
CAGATCGGCA CCGTGGTCAA GCTCGTGCGC GTGCTGATGC TCGGCCCCGT CGTCGTCGGG
CTTTCCCTGC TGGCGCCCCG CTTCGGCGAG ACCGTCGCCG GGCCGAACCC GGCGGGGCGG
CTGCGTCTGT TCAAGCTCGT TCCGTGGTTC ATCCTCGGCT TCCTGGTGCT GGCCGCCTGC
CGCTCGCTCG GGCTGGTGCC GGATCCCGCC ATCGCGCCGA TCACCCGGGT GGCCGGAATC
CTCACCGTTG TCTCGATGGC CGCCCTCGGG CTCGGCGTCG ATCTGCGGGT GATCGGGCGG
GTCGGCAGCC GCGTCACTGC CGCCGTGACC CTGTCGCTCG TGCTGCTGCT CCTCGTCAGC
CTGGGTCTGA TCTTCGTGCT TCGCCTCGGG TGA
 
Protein sequence
MRRLHLPHRI SPLAALGPGI ALCLALTLVS IGLQRLEEDV FGHPYVEALV IAILLGMAMR 
TLWQPGPLWR SGIAFSAKQL LEVAVMLLGA SISFAAILAS GPVLLAAIVA TVAVTIAASF
AISRLLGLAV RMSILIACGN AICGNSAIAA VAPVIGAGSD DIASSISFTA ILGVLMVLGL
PLLIPLLGLS AGQYGILAGL TVYAVPQVLA ATVPAGLVAT QIGTVVKLVR VLMLGPVVVG
LSLLAPRFGE TVAGPNPAGR LRLFKLVPWF ILGFLVLAAC RSLGLVPDPA IAPITRVAGI
LTVVSMAALG LGVDLRVIGR VGSRVTAAVT LSLVLLLLVS LGLIFVLRLG