Gene Mpop_0173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_0173 
Symbol 
ID6311922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp185247 
End bp186038 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content70% 
IMG OID642648880 
Productputative transcriptional regulator, Crp/Fnr family 
Protein accessionYP_001922897 
Protein GI188579452 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTCAG ACGTCGACGA CCTGCTCAGC GGCAACCTCC TCCTCGGCGC CTTGCGCTTG 
CCCGACCAGG CGCTGCTTCG GCCGCACCTG GAACTGAGGG AGTACCGACG CGGCGAGGCG
CTGTTCGACG CAGGCGATGA CCTCGGCCAC ATCACCTTCC CGCTCGGTCA GTGCGTGGCC
GCCCTCCTCA TCGGGCTCAG CGACGGACGC GCCGTCGAGA CGGCCACGGT CGGGCGCGAG
GGGGCGGTCG GCGGCGTCGT CAGCCAGGGC TCCCTGCCGG CCTTTAGCCG GGCCGTCGTC
CAGATTCCCG GCTCGGTGCT GCGCATCGAG GCGCCGGTGC TGCAGCAGAT CAAGCAGACG
TCCCCGGGCC TGCGTAACCT GATCACCCGC TACTCCGACT GCCTGCTTGC CCAGGTGCTC
CAGTCGGTGG CCTGCAACGC CAGCCACACC ATCGAGGCGC GCTGCGCCCG GTGGTTGCTG
GGTTTGCAGG ACCGTCTCGG CAGCGACGTC CTGCCGGTCA CCCACGAGGT GCTGGCCGAA
CTCCTGGGCG TGCAACGCTC CTACCTGACG CGGACGCTGC GGACCCTGCA GCAGCAAGGG
CTGATCCAGG CCCGGCGCGG GCGCATCATC ATCCTGAGCC GCCCAGCGGT CGAGGAGACC
GCCTGCGAGT GCCACGGCGC GGTCAAGCGC CACTTCGAGA CCGTGCTGGG TGCCGTCTAC
AACGCCTCCG GTACGCTGGT GTCCCTGAGA CCCGCGCCAG TGGGTGAGAA GCCGATGTGC
CAGGCCGTCT GA
 
Protein sequence
MPSDVDDLLS GNLLLGALRL PDQALLRPHL ELREYRRGEA LFDAGDDLGH ITFPLGQCVA 
ALLIGLSDGR AVETATVGRE GAVGGVVSQG SLPAFSRAVV QIPGSVLRIE APVLQQIKQT
SPGLRNLITR YSDCLLAQVL QSVACNASHT IEARCARWLL GLQDRLGSDV LPVTHEVLAE
LLGVQRSYLT RTLRTLQQQG LIQARRGRII ILSRPAVEET ACECHGAVKR HFETVLGAVY
NASGTLVSLR PAPVGEKPMC QAV