Gene Mpop_0116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_0116 
Symbol 
ID6310661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp121145 
End bp121951 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content72% 
IMG OID642648826 
Productprotein of unknown function DUF81 
Protein accessionYP_001922843 
Protein GI188579398 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.13845 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGGCT TGCTCACATC CGGTCTCGCG ACCGGCTCGG GCGGGGTCGT CGGCGTGATC 
CTCGGCCTCG TCGGCGGGGG CGGTTCGATC CTGGCGGTCC CGCTCCTGAC CTACGTGGTC
GGGGTGAGCT CGCCCCATGT GGCGATCGGC ACCAGTGCCC TGGCGGTCTC GGTCAGCGCG
GCCGGCAACC TCGTCTCGCA ATGGCGGGCC GGGAACGTGA AGTGGCGGTG CGCGGCGGTG
TTCTCGGCAG CCGGCATCCT CGGCGCGCTC GCCGGCTCGG CGGCGGCCAA GGCGGTCGAC
GGGCAGAGCC TCCTGGCGCT GTTCGGGGTC GTGATGCTGG TGGTCGGGGG GCTGATGCTG
CGCAAGCGGC GCGGTGAGGG CGACCCGGAG GTGCGCCTGA CCAAGATCAG CGCCCCGGTG
CTCCTGCCCT GGCTGCTCGG CATCGGCTTC GCGGTGGGCC TGTTCTCCGG CTTCTTCGGC
ATCGGCGGGG GATTCCTGAT CGTGCCGGGC TTGATGCTGG CGACCTCTAT GCCGCTGCCG
ATGGCCATCG GCACCTCGCT GGTCGCGGTC AGCGCCTTCG GGGCCGCCAC CGCGGCAAGC
TACGCCGTCT CAGGCCTGAT CGACTGGCCG GTGGCTGGCC TATTCATCCT GGGCGGCGTG
CTCGGCGGCC TCGTCGGTGC CGGCCTCGGC CGACGGCTCA GCCAGCACAA GCGCGCCCTG
ACCCTCACCT TCGCCGGCCT CGTGATCCTG GTCGGCCTCT ACGTGGTCGC CCGCGGAGTC
CTGCCGCTCC TCGGAGCCAC AACCTGA
 
Protein sequence
MPGLLTSGLA TGSGGVVGVI LGLVGGGGSI LAVPLLTYVV GVSSPHVAIG TSALAVSVSA 
AGNLVSQWRA GNVKWRCAAV FSAAGILGAL AGSAAAKAVD GQSLLALFGV VMLVVGGLML
RKRRGEGDPE VRLTKISAPV LLPWLLGIGF AVGLFSGFFG IGGGFLIVPG LMLATSMPLP
MAIGTSLVAV SAFGAATAAS YAVSGLIDWP VAGLFILGGV LGGLVGAGLG RRLSQHKRAL
TLTFAGLVIL VGLYVVARGV LPLLGATT