| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_0111 |
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| Symbol | |
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| ID | 6310844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | - |
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| Start bp | 117081 |
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| End bp | 118820 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 642648821 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_001922838 |
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| Protein GI | 188579393 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.429948 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.384279 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGACCC GTCTTGCCGC CGCCTGGGCT GCGGTGGCGC TGCTTGCCGC CGTCCTGGCG
GGGCCCGCGC TCGCCCACGA GGGGCACGAC CACGGTGCAT CGCCGCCGCC CGTCTCGAAG
ACCATCGCCC CGCGCGGCGA GGCGCTATCG GACGCCTTCG AGCTCGTCGC CATCCCGCGC
GACGGCACCC TGACGCTGTT CCTCGACCGC TTCCGGACGA ACGAGCCGGT GACGGGCGCG
ACCATCGAGG TCGAGACCCC CGAAGGCCCG AAGGTCGCGA CCGCAACGCC CGACGGCGGC
TACGCCCTGC CGGCCCCGTG GCTGTCGAAG CCCGGCCGGC ACGAGCTCGT CGCGACCGTC
ACGGCGGGCG AGGACGTCGA CGTGCTGACC GTCGGGGTCA CCGTGCCAGA CCCGAAGGTC
GCCGCGGCCG CGGCGTCTGC CAAGCCGACC CCGGCTCAGG CTGCCCTGGC GCGCGTCTCC
GAGGTCGCCC ACGACGTCCG AGAGCGGCTG ACGGCCAAGG ACCCGGCCTT GGTGGCCGCG
GTCGCCGTCG CCTTCCTGCT CGGCGTGCTC GTGACGGCGC TCGCACGCGG GCGCCGTGCC
GCGCCGGCGG TGGCGCTGGT CGCCATCGGC ATCACCATCG TCCTCGGCAC CGCCGCCTTC
GCGCACGGCG ACGAGGACCA CGGCACGCCC GTGCAGAGAG CGGCGCTGAT CGAGCCGCGC
CAGACCACGC CGGCCTTGTC GGACCTCGCG CAGCGCCTGC CCGACGGCTC CGTCTTCGTG
CCGAAGCCGA CGCAACGGCT GCTGGTCCTG CGCACCACCA TGACCGAGCA GGGCAGCTTC
CACCGCTCGG TCGAGCTGCC CGGCCGCATC ATCCCGGACC CCAACGCCAG CGGCGTCGTG
CAGTCCTCGG TCGGCGGCCG TCTCTCGCCT CCGCCGTCCG GCCTGTTCCC GCGCCTCGGC
ACCAAGGTGC GCAAGGGCGA CGTGCTCGCG ACCGTGACCC CGCCGGTCCA GGCCGTCGAC
GTCTCCGACA TGCGCCAGCG CCAGGGCGAG CTCGACCAGC AGATCGCCAT CGTCGAGCGC
CGGGTCGAGC GCTACCGGAA GCTCACCACG AGCGGCGCCG TCGCCCAGAC CCAACTCGAC
GACGCGGTCG CCGAGCTCAA CGGGCTGCAC GACCGCCGCG CGGCCCTCGA CAAGATCCGT
CAACAGCCCG AGACCCTGGT CGCCCCCGTC GACGGCGTGG TGGCGCAGGC GACCGCCGTG
GCCGGCCAGA TGGCGGCATC CGGCGCCATG GTCTTCCAGA TCGTCGCCCC CAACCGCCTC
TGGGTCGAGG CCCTCAGCTT CGACGCCCTG ACGGCGGCCC AGGACGCCAC GGCACGGCTC
GCCGACGGGC GCACCCTGAA GCTCGCCTAC CAGGGCACGG GGCTCGCCGA CCGCAACCAG
GCCATCCCGG TCCAGTTCGC GGTGCAGGGC GACGCCTCCG GCTTGCGGGT CGGCCAGTTC
GTCACCGTGC TGGCCGGGAC CGATACGGAG CAGTCCGGCC TGGCGCTGCC GCGCGCGGCG
GTCGTGCGCA CCGGCAACGG GCAGGACGTC GTCTACGAGC ACACGACCGC CGAGCGCTTC
GAGGCGCGGC CCGTGCGCGT CGAGCCGCTC GACGGCGGCC GCGTGCTGGT GGCGGAGGGG
ATCGGACCCG GCAAGCGGGT GGTGACCCAG GGCGCCGAGC TCCTCGACCA GGTGCGCTGA
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| Protein sequence | MSTRLAAAWA AVALLAAVLA GPALAHEGHD HGASPPPVSK TIAPRGEALS DAFELVAIPR
DGTLTLFLDR FRTNEPVTGA TIEVETPEGP KVATATPDGG YALPAPWLSK PGRHELVATV
TAGEDVDVLT VGVTVPDPKV AAAAASAKPT PAQAALARVS EVAHDVRERL TAKDPALVAA
VAVAFLLGVL VTALARGRRA APAVALVAIG ITIVLGTAAF AHGDEDHGTP VQRAALIEPR
QTTPALSDLA QRLPDGSVFV PKPTQRLLVL RTTMTEQGSF HRSVELPGRI IPDPNASGVV
QSSVGGRLSP PPSGLFPRLG TKVRKGDVLA TVTPPVQAVD VSDMRQRQGE LDQQIAIVER
RVERYRKLTT SGAVAQTQLD DAVAELNGLH DRRAALDKIR QQPETLVAPV DGVVAQATAV
AGQMAASGAM VFQIVAPNRL WVEALSFDAL TAAQDATARL ADGRTLKLAY QGTGLADRNQ
AIPVQFAVQG DASGLRVGQF VTVLAGTDTE QSGLALPRAA VVRTGNGQDV VYEHTTAERF
EARPVRVEPL DGGRVLVAEG IGPGKRVVTQ GAELLDQVR
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