Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_0092 |
Symbol | |
ID | 6310626 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 93093 |
End bp | 95321 |
Gene Length | 2229 bp |
Protein Length | 742 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642648803 |
Product | PAS/PAC sensor hybrid histidine kinase |
Protein accession | YP_001922820 |
Protein GI | 188579375 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCACGT CCGGGTGCGA CCCGCGGTCG CCAGGGACCG GCCGAAGGTC CAGGATTGCC GTCGGTCGCG GGACGCCCAT TTCCGGCGGC GTGGCCAGCG TGACCGATCC CATTCCATTC CTGCCCGATG GTGGCCTGAC AGGCGCGGAG ATGCGCGCCC GGGACTGGGA AGCGACCTCG CTCGGCCCGC CCGGTGACTG GCCGCCGGCG CTGCGCAACG CGCTAACGCT GATGCTGGAG TGCCCGACGG CGATGTTCCT CGCCTGGGGG CCCGATCTCC TCTGCTTCTA CAACGACGCC TATCGCCCGA TCCTCGGCTA CCGGCTCCCG ACCGCGCTCG GTCGCCCGTT CCCAGAGGTC TGGGCGAGCA TCTGGACCGA GATCGAGCCG CTCGTCTCCG CCACGCTCGC GGGGCGCCAA CAGGTCCTCA CCGACCTGAT GCTCGACCTC TCCCGCGAGG GGAAGCCGGA GAAGAGTTGG TGGTCCTTCA CCTACTCGCC GGTCCGCGAC GACGCGGGCG CGATCAACGG CATGCTCTGC GTCACGAAGG AGACCACCGG ACACATCTCG GGCCAGGCGC GCCTGCGGGA GATGAACGAG ACGCTGGAGC GCCGCGTCGA CGAGGCGCTG GCGGAGCGCA AGCTCTGGGC GCAGGTCTTC GAGACGAGCG ACGCCCTCGT CGGCGCCCTC GACACAGGGT ACCGCGTGCT GCTGCTGAAC CGGGCGCTGG CAGACGAGTT CGAGACGCTC TTCGGCGTTC GCCCCGCCGT CGGGGACAGC CTGCCGGAAC TCCTGGCCGA CAAGCCCGCG CACTTGGCCG TGGCTCAAGC CGTCTGGAAC CGGGCGCTGG CGGGCGAGGA GTTCACGCGG ATCGAGGAGT TCGGCGACCC CACGCGCAAG CGTCGCTCCT ACGAGATGCG CTTCACCACG CTGCGGGATG CCGAGGGGCG CGTGGTCGGC GCCTTCCAGT ACGCCACCGA CGTCACGCAG CGCCTGCGCG AGCAGGAGCA GCTGGCCCGC GCCGAGGAAG CCCTGCGGCA AGCCCAGAAG ATGGAAGCGG TCGGGCAATT GACCGGCGGG GTCGCGCACG ACTTCAACAA CCTGCTCACC ATCATCCGGT CCTCGGTCGA CTTCCTGCGT CGGCCGAACC TGCCGGAGGA GCGGCGAACC CGGTACATGG ACGCGGTCTC GGACACGGTG GAGCGGGCCG CCAAGCTCAC GGGCCAGCTC CTCGCCTTCG CGCGCCGGCA GACGCTCCAG CCCGAGGTGT TCGACGTCGG GGAGCGGCTC GGCGGCGTCG TCTCGATGCT GAACTCGATC ACGGGCGCGC GTATCACCAT CGAGACCGCG CTGCCCGGGC GTCCCTGCTA CGTGCGGGCG GATCCGAGCC AGTTCGAGAC CGCGCTCGTC AACCTGGCGG TGAACGCCCG CGACGCCATG GACGGCGCGG GAACGCTGAC GCTCGGCGTG GCTCCGGTCG CCTCGATGCC GCCCATCCGC GGACATGCCG GGGGTAACGG AGCGTTCGTC GCGATGTCGG TCACGGACGA AGGCTCCGGG ATCGCGCCGG ACCTCCTGGG CCGCATCTTC GAGCCGTTCT TCACCACGAA GGAGGTCGGC AAGGGTACGG GCCTCGGGCT CTCCCAGGTC ATCGGGTTCG CCAAGCAGTC CGGCGGCGAC GTCGACGTCG CCAGCGAGCC GGGGCGCGGC ACGACCTTCA CCCTCTACCT GCCCGAGGTC GACCCACCCA AGCCGGCCGT GGAGGTCGAG GGGGACGATG ACGGGCCGGG CGAGGTGCGC GCTCTCTGCG TCCTGGTGGT CGAGGACAAC CTCGACGTCG GGAGCTTCTG CACGCAGATC CTGGAGGATC TCGGGCACTC CGTTGTCTGG GCCCACGACG CCGAGGAGGC GCTGGCCGAG ATGGAGAAGG TGCCGTTCCG CTTCGACGCC GTCTTCTCGG ACGTCGTGAT GCCGGGAATG GGCGGGGTCG AGCTCGCCAG GAGGCTTCGC GCCAGCCACC CGGACCTGCC GGTGATCCTG ACGACGGGCT ACAGCGACGT GCTCGCCCGC GACGACGCGC ACGGGTTCGA CCTCGTGCGC AAGCCCTATT CGGCCGAGCA GGTCGCGCAC GCGTTCAGGA CCGTGCACGT TCGGCGTCGC GGGCGAGAGG GCACCGCCCG GTCTAAGGCC GCAGCGATCA CGGGCAACTC GTCGAGCCGG GTGGTGTAG
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Protein sequence | MRTSGCDPRS PGTGRRSRIA VGRGTPISGG VASVTDPIPF LPDGGLTGAE MRARDWEATS LGPPGDWPPA LRNALTLMLE CPTAMFLAWG PDLLCFYNDA YRPILGYRLP TALGRPFPEV WASIWTEIEP LVSATLAGRQ QVLTDLMLDL SREGKPEKSW WSFTYSPVRD DAGAINGMLC VTKETTGHIS GQARLREMNE TLERRVDEAL AERKLWAQVF ETSDALVGAL DTGYRVLLLN RALADEFETL FGVRPAVGDS LPELLADKPA HLAVAQAVWN RALAGEEFTR IEEFGDPTRK RRSYEMRFTT LRDAEGRVVG AFQYATDVTQ RLREQEQLAR AEEALRQAQK MEAVGQLTGG VAHDFNNLLT IIRSSVDFLR RPNLPEERRT RYMDAVSDTV ERAAKLTGQL LAFARRQTLQ PEVFDVGERL GGVVSMLNSI TGARITIETA LPGRPCYVRA DPSQFETALV NLAVNARDAM DGAGTLTLGV APVASMPPIR GHAGGNGAFV AMSVTDEGSG IAPDLLGRIF EPFFTTKEVG KGTGLGLSQV IGFAKQSGGD VDVASEPGRG TTFTLYLPEV DPPKPAVEVE GDDDGPGEVR ALCVLVVEDN LDVGSFCTQI LEDLGHSVVW AHDAEEALAE MEKVPFRFDA VFSDVVMPGM GGVELARRLR ASHPDLPVIL TTGYSDVLAR DDAHGFDLVR KPYSAEQVAH AFRTVHVRRR GREGTARSKA AAITGNSSSR VV
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