| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_0069 |
|---|
| Symbol | |
|---|
| ID | 6310359 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 75117 |
|---|
| End bp | 76625 |
|---|
| Gene Length | 1509 bp |
|---|
| Protein Length | 502 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642648783 |
|---|
| Product | Integrase catalytic region |
|---|
| Protein accession | YP_001922800 |
|---|
| Protein GI | 188579355 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4584] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.83421 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGATCG TGGAGACCAT CGCCAAAATC CGGCGGCTCT TCCGCAACGA GCACAAGAGC
ATCCGCGAGA TCTCGCGGGA GCTGCGCCTG TCGCGCAAGG TCGTGCGCAA GGCGTTGCGC
TCGGACAAGA CCGCCTTCGC CTACAAGCGC CAGCACCAGC CACGGCCGCA GCTCGACGGC
CATCTCCCTC GCCTCGATGA TCTACTCGCC GAGGAACTGG CCAAGCCCAA GCGGGAACGG
CTGAGCTATG TGCGCCTGTT CGAGGGGTTG CGCGAGGAGG GCTATGCCGG CGGCTACGAT
GCGGTGCGCC GCTACGCCCA GCAGTTCTTC GCAGAGCGGG CCGCCACGGC TCAGGGCGTT
TTCGTGCCGC TCGCCTTTGC CCCCGGCGAG GCCTACCAGT TCGACTGGAG CCACGAGAGC
GTGCGACTGG CCGGCACGAC CGTGCAGGTG AAGGTCGCCC ACATCCGGCT CTGCCATAGT
CGGTTCTTCC TGGTGCGCGC CTATCCGCGC GAGACGCAGG AGATGGTCTT CGACGCCCAC
GAGCAGGCCT TCCGCCTCTT CGGCGGCTCC TGCCGGCGCG GCATCTATGA CAACATGAGG
ACGGCCGTGG CGACGATCTT CGTCGGCCGC CAGCGCACCT TCAACCGCCG CTTCCTGCAG
ATGTGCTCGC ACCATCTCGT CGAGCCAACC GCCTGCAATC CCTGTGCGGG CTGGGAGAAG
GGGCAGGTCG AGAACCAGGT GCGCACCGCT CGCGGACGCT TCTTCAAGCC GATCCTGCGC
TTCGAGACGC TGGCCGACCT CAACCGTTGG CTCGAACATC GCTGCCTGGA CTGGGCGGCC
ACGGCGCCTC ATCCAGTCCA GAAGCATCGC ACAGTGCGCG AGGTGTTCGA AGCCGAGGAG
CGCCCGGCGC TGATCCCCTA CCGCGGGGCT TTCGACGGCT TCCACGAGGT CGATGTTGCC
ACCTCACGCA CCTGCCTCGT GCGCTACGAT CACAATCGCT ACTCCGTGGC CGCACGAGCT
GCGGGTCGGC GCGTGCAACT GCGTGCCTAT GCCGAACGCA TCCTCGTCTT CCTGAACGGT
GAGCCGATTG CTGACCATAG GCGCCGTTTT GGGCGCAACG AGACCATCTA CAATCCCTGG
CACTATCTGC CCGTGCTGGC CCGCAAGCCC GGCGCTCTGA GGAACGGCGA ACCGTTCCGC
CACTGGGACT TGCCAACGGG CCTGGCCGAG ATCCGCGAGC GGCTGAAGGC CCACACCGAC
GGTGATCGCC AGTTCGTCGA GATCCTCTCG GCCGTGCCGG CAGCCGGACT GGAGGCGGTC
GAAGCGGCCT GCCGCGCCGC CCTGTCCATG CGCCTCTTCA GCGCCGATGC CGTGCTCAAC
CTGCTGGCTC GTGCCAACGA GCCGGACCTG CCGGCTGCCG TGCTTACGCC CGCGTCCCTG
ACGCTCGACC TGGAGCCGCT AGCCGACTGC GCCCGCTACG ACAGCCTTCG CGTGCTGGAG
GTGCTGTGA
|
|---|
| Protein sequence | MLIVETIAKI RRLFRNEHKS IREISRELRL SRKVVRKALR SDKTAFAYKR QHQPRPQLDG
HLPRLDDLLA EELAKPKRER LSYVRLFEGL REEGYAGGYD AVRRYAQQFF AERAATAQGV
FVPLAFAPGE AYQFDWSHES VRLAGTTVQV KVAHIRLCHS RFFLVRAYPR ETQEMVFDAH
EQAFRLFGGS CRRGIYDNMR TAVATIFVGR QRTFNRRFLQ MCSHHLVEPT ACNPCAGWEK
GQVENQVRTA RGRFFKPILR FETLADLNRW LEHRCLDWAA TAPHPVQKHR TVREVFEAEE
RPALIPYRGA FDGFHEVDVA TSRTCLVRYD HNRYSVAARA AGRRVQLRAY AERILVFLNG
EPIADHRRRF GRNETIYNPW HYLPVLARKP GALRNGEPFR HWDLPTGLAE IRERLKAHTD
GDRQFVEILS AVPAAGLEAV EAACRAALSM RLFSADAVLN LLARANEPDL PAAVLTPASL
TLDLEPLADC ARYDSLRVLE VL
|
|---|
| |