Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_0043 |
Symbol | |
ID | 6311138 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 48445 |
End bp | 49140 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 642648756 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_001922774 |
Protein GI | 188579329 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0169991 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCGTG TGGGCGACGG TGGCGACAGG GACGGCACGC CGGAGGGGCG CGGCCTTCTC TCCGATCAGA TCCGCAACGC ACTGACGGAC GAGATCGCCG CCGGCGTCCT CGCCGCGGGC ATCGCCCTCG ACGAGCAGGA TCTCGCCGAC CGCTTCGGCG CTTCGCGCAC CCCCGTCCGC GAAGCCCTGC GCCAGCTCGC GGCCAACGGC CTCGTCGAGA TGCGGCCCCG GCGCGGGGTC GTCGTCGCCC GCACGACGCC CGAACGGATC ATGGAGATGT TCGAGACGAC CGCCGAATTC GAGGCCCTTT GCGTCCGGCT CGCGACCTAC CGGATGACGC CGCTCGAACT CAGCGCCTTG ATGGACCTTC ACGAGCAATC GGCGGTGCCG GTCGCGGCGC AGGACTACGA TACCTACGAC GCCCTCAACC GCGCCTTCCA CGAGGCTCTG TACCGCGCGA CCCATAACGG CTTCATGGCC GAGCAGGCGC TGGCGATCCG CTCCCGCCTC TCGGCCTTTC GCCGGACGCA GTTGCGCCAG GGCGAGCGCA TCCTGCGCTC GCGTGCCGAG CACGGCGAGA TCCTCCAGGC GATCGCCGAA GGCGACGGCG ACATCGCGGC GCGTCGGATG CGCGCGCACA TGCTCAATGC CGCGAGCGCG CTCGGCCGCT ACGTCGCGGA CCATGCCAGC ACGTGA
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Protein sequence | MMRVGDGGDR DGTPEGRGLL SDQIRNALTD EIAAGVLAAG IALDEQDLAD RFGASRTPVR EALRQLAANG LVEMRPRRGV VVARTTPERI MEMFETTAEF EALCVRLATY RMTPLELSAL MDLHEQSAVP VAAQDYDTYD ALNRAFHEAL YRATHNGFMA EQALAIRSRL SAFRRTQLRQ GERILRSRAE HGEILQAIAE GDGDIAARRM RAHMLNAASA LGRYVADHAS T
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