Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_0042 |
Symbol | |
ID | 6311137 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 47337 |
End bp | 48335 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 642648755 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001922773 |
Protein GI | 188579328 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.15937 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0190305 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGACACA AGCCTCTGCG CGAGCAGGTC ATCGTCATCA CGGGAGCGTC CAGCGGCATC GGACTGGCGA CCGCCCGGAT GGCGGCGCGG CGCGGCGCCC GGCTCGTGCT CGCCGCCCGC AGCGGAGACG TGCTCGCCGG GATCGCGGTC GAGTTCGGCC CGCGTGCCAC GTTCGTGGCT GCCGATGTCG GCCGACGGGA GGATGTTCAG GCGATCGCCG ACCACGCCGT CGCGACCTTC GGCGGTTTCG ACACCTGGGT GAACGTGGCC GGCCTGACCG TCTACGGCCC CCTGCGCGAG ATCGATCCCG AGGACCATGA GCGGCTGATC CGCACGAACC TCTGGGGTAC GGTCTATGGA TCGCTCATCG CCGCCGAGCA CCTGCGTCGG CACGGCGGCG CCATCATCAA TGTCGGCAGC ATCGCCTCCG ACCTCGCCTT TCCGTTCCAG GGCCTGTACG CCACCTCCAA ACACGCGGTG AAGGGCTTCA CCGATACGCT GCGCATGGAG TTGAAGGCGG AGGGGGCGCC GGTCTCCGTG ACGCTGGTGA AACCCGCCTC CATCGACACG CCGCTGCCGG CCAGAGCCCG CAACTACATG GACCGCGAGC CGACGCTGCC GCCGCCGATC TACCCGCCGC AGGAGGTCGC CAACGCGATC CTGCACGCCG CCGTTCACCC GCAGCGGGAC ATCTTCGTCG GCGGCGGCGG CAAGCTGTTC GTCATGGGCA AGGAGTTCGC GCCGGGGGCC TACGACGAAC TCGCGCCGGC CATCATCGCT CTGCAGAAGC GGTCGGAGCC GCCGCGGAAC CCGGAGGGCG CCCTGCACGC GCCGCGGGCC GCCGGCCGGG AACGGGGCGA CCCGCCGGTC CCGGTGATGC GCACGAGCGC CTACACGCGC GCGACCCTGC ACCCGCTCGC AACGGCAGGA GTTGCGATCG GGGTTGCCGC GACGGCCGCT CTGATCCTCG GCGGCGGACG GGTGACGCGG CGGTTCTGA
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Protein sequence | MGHKPLREQV IVITGASSGI GLATARMAAR RGARLVLAAR SGDVLAGIAV EFGPRATFVA ADVGRREDVQ AIADHAVATF GGFDTWVNVA GLTVYGPLRE IDPEDHERLI RTNLWGTVYG SLIAAEHLRR HGGAIINVGS IASDLAFPFQ GLYATSKHAV KGFTDTLRME LKAEGAPVSV TLVKPASIDT PLPARARNYM DREPTLPPPI YPPQEVANAI LHAAVHPQRD IFVGGGGKLF VMGKEFAPGA YDELAPAIIA LQKRSEPPRN PEGALHAPRA AGRERGDPPV PVMRTSAYTR ATLHPLATAG VAIGVAATAA LILGGGRVTR RF
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