Gene Mpop_0042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_0042 
Symbol 
ID6311137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp47337 
End bp48335 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content71% 
IMG OID642648755 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001922773 
Protein GI188579328 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.15937 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0190305 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACACA AGCCTCTGCG CGAGCAGGTC ATCGTCATCA CGGGAGCGTC CAGCGGCATC 
GGACTGGCGA CCGCCCGGAT GGCGGCGCGG CGCGGCGCCC GGCTCGTGCT CGCCGCCCGC
AGCGGAGACG TGCTCGCCGG GATCGCGGTC GAGTTCGGCC CGCGTGCCAC GTTCGTGGCT
GCCGATGTCG GCCGACGGGA GGATGTTCAG GCGATCGCCG ACCACGCCGT CGCGACCTTC
GGCGGTTTCG ACACCTGGGT GAACGTGGCC GGCCTGACCG TCTACGGCCC CCTGCGCGAG
ATCGATCCCG AGGACCATGA GCGGCTGATC CGCACGAACC TCTGGGGTAC GGTCTATGGA
TCGCTCATCG CCGCCGAGCA CCTGCGTCGG CACGGCGGCG CCATCATCAA TGTCGGCAGC
ATCGCCTCCG ACCTCGCCTT TCCGTTCCAG GGCCTGTACG CCACCTCCAA ACACGCGGTG
AAGGGCTTCA CCGATACGCT GCGCATGGAG TTGAAGGCGG AGGGGGCGCC GGTCTCCGTG
ACGCTGGTGA AACCCGCCTC CATCGACACG CCGCTGCCGG CCAGAGCCCG CAACTACATG
GACCGCGAGC CGACGCTGCC GCCGCCGATC TACCCGCCGC AGGAGGTCGC CAACGCGATC
CTGCACGCCG CCGTTCACCC GCAGCGGGAC ATCTTCGTCG GCGGCGGCGG CAAGCTGTTC
GTCATGGGCA AGGAGTTCGC GCCGGGGGCC TACGACGAAC TCGCGCCGGC CATCATCGCT
CTGCAGAAGC GGTCGGAGCC GCCGCGGAAC CCGGAGGGCG CCCTGCACGC GCCGCGGGCC
GCCGGCCGGG AACGGGGCGA CCCGCCGGTC CCGGTGATGC GCACGAGCGC CTACACGCGC
GCGACCCTGC ACCCGCTCGC AACGGCAGGA GTTGCGATCG GGGTTGCCGC GACGGCCGCT
CTGATCCTCG GCGGCGGACG GGTGACGCGG CGGTTCTGA
 
Protein sequence
MGHKPLREQV IVITGASSGI GLATARMAAR RGARLVLAAR SGDVLAGIAV EFGPRATFVA 
ADVGRREDVQ AIADHAVATF GGFDTWVNVA GLTVYGPLRE IDPEDHERLI RTNLWGTVYG
SLIAAEHLRR HGGAIINVGS IASDLAFPFQ GLYATSKHAV KGFTDTLRME LKAEGAPVSV
TLVKPASIDT PLPARARNYM DREPTLPPPI YPPQEVANAI LHAAVHPQRD IFVGGGGKLF
VMGKEFAPGA YDELAPAIIA LQKRSEPPRN PEGALHAPRA AGRERGDPPV PVMRTSAYTR
ATLHPLATAG VAIGVAATAA LILGGGRVTR RF