Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_0008 |
Symbol | |
ID | 6309003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | + |
Start bp | 8864 |
End bp | 11047 |
Gene Length | 2184 bp |
Protein Length | 727 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 642648721 |
Product | helicase, RecD/TraA family |
Protein accession | YP_001922739 |
Protein GI | 188579294 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
TIGRFAM ID | [TIGR01448] helicase, putative, RecD/TraA family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCGC CGGTGCGGCC ACCCGACCTC GACGTGTTGG CGGGCTCGGT CGAGCGCGTC ACTTTCCACA GCGCCGAGAC GGGATTCTGC GTCCTGAAGG TCCATGCCCG CGGCCGGCGC GATCTCGTGC CGGTGGTGGG CCATGCGCCG GCCATTGCCG CGGGCGAGTG GCTGACGGCG GCGGGCCGCT GGACCACGGA TCGCGAGCAC GGCCTCCAGT TCCGCGCCGA GACGCTCCAG GTCACACCGC CGACCGGCAT CGAGGGGATC GAACGTTATC TCGCCTCGGG GCAGATGCGC GGCATCGGCC CGATGATGGC CAAGCGCATC GTCGCGGCCT TCGGCGAGGC GGTGTTCGAG ATCATCGAGG CCGAGCCCGC CCGCCTCACC GAGGTCGAGG GCATCGGCCG CAAGCGCGCC GCCCGCATCG TCAAGGGCTG GGCCGAGCAG AAGGCGGTGC GGGAGATCAT GATCTTCCTG CACGCCCACG GCGTCGGCAC CGCGCGGGCG ACCCGCATCT TCCGCACCTA TGGCGGCGAT TCGCTGAAGG TCATGGCGGA GGATCCGTAC CGCCTCGCCC GCGACATCCG CGGCATCGGC TTCCGCACGG CGGATTCCAT CGCACTGCGC CTCGGCCTCG CTCGCGACGC GCCGCAGCGG CTCGCCGCGG GCGTGTCCTA CGCGCTTCAG AAGGCGATGG ACGAGGGCCA TTGCGGGTTG CCCGTCGAGC GGCTGGTGCG GCTCGCCGCC GATCTCCTCG AAGTGGCGCC CGACCTCGTC CGGGTCGCGG CCGCGCTCGT CCTGCGTGAG GGCCGCGAGG TCGTTGCCGA CACCCTGCGC GGCGAGCCCT GCCTGTTCCT GAAGGGACTG CACGGCGCCG AGCGCGCCAT CGCCATGCGG ATGGTCGAGA GGGCGACGGG AGCGCCGCCC TGGCCGGAGA TCGATTTCGC CCTCGCTCGC CCCTGGGTCG AGGCGAAGAC CGGCAAGACG CTCTCGGCCT CGCAGGCCGA GGCGGTCGGG CTCGTGCTGC GCTCGAAGCT CTGCGTGCTC ACCGGCGGTC CCGGCGTCGG CAAGACCTCC ACCCTCGACG CGATCCTGCG CATCCTCACG GCCAAGGGCG TGCGCGTGCT GCTCGCCGCG CCCACCGGCC GCGCCGCCAA GCGCATGGCC GAGCAGACCG GGCTGGAGGC CCGCACCCTC CACCGCCTGC TGGAGATCGA CCCGCGCAAC GGCGGCTTCC AGCGCGGGGA GGACAACCCG CTCGATTGCG ATCTCCTCGT CATCGACGAG ACCTCGATGG TCGACGTGCC GCTGATGCAT GCCGTGCTCA AGGCGGTGCC GGAGAGGGCC GGCCTGATCC TCGTCGGCGA CGTCGATCAG CTGCCCTCCG TCGGCCCCGG GCAGGTGCTC GCCGACCTGA TCGCGTCCGG CCGCGTTCCG GTGGCCCGCC TGACCGAGAT CTTCCGCCAG GCGGCGCAGA GCCGGATCGT CGTCAATGCC CACAGCATCA ACACCGGCCG CATGCCGGTC ACGGCGCCGA AGGGGGAGGA GAGCGACTTC TACCTCGTGG AGATCGAGGA TGCCGAGGCG GGCGTGGAGA CGCTGATCGA CCTCGTGACC CGCCGCATCC CGCGCCGCTT CGGCCTCGAT CCGGCCCGCG ACATCCAAGT GCTGACGCCG ATGATCCGCG GCTCGCTCGG CAGCCGCAAC CTCAACCACG CCCTCCAGCG CGTGTTGAAT CCCTCCCCCC CGGCGCAGGT GGAGCGCTTC GGCTGGCGCT TCGCCCCCGG CGACCGAGTG ATGGAGACCC GGAACGACTA CGACCGCGAC GTGTTCAACG GCGATCTCGG CACGGTGAGC GCCATCGACG CGGAGGAGGA GGCGCTCGTG GTCGATTTCG ACGGTCGGCC GGTGATCTAC CCGTTCGGCG AACTCGACAC GCTGGTGCCG GCCTTCGCCA CGACGATCCA CAAGGCGCAG GGTTCGGAAT ACCCGGCCGT GGTGATCCCG GTGGTCACGC AGCACCGCAC GATGCTCGCA CGCAACCTCC TCTATACCGG CGTGACCCGC GGGCGCCGTC TCGTCGTGCT CGTGGGTCAG CGCCGGGCGG TCGGCTTGGC GATCCGCGAG GGCGCGGCGC GGCGGCGCTG GACCAAGCTG CGGGAATGGC TCGAGACCGC CTGA
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Protein sequence | MNAPVRPPDL DVLAGSVERV TFHSAETGFC VLKVHARGRR DLVPVVGHAP AIAAGEWLTA AGRWTTDREH GLQFRAETLQ VTPPTGIEGI ERYLASGQMR GIGPMMAKRI VAAFGEAVFE IIEAEPARLT EVEGIGRKRA ARIVKGWAEQ KAVREIMIFL HAHGVGTARA TRIFRTYGGD SLKVMAEDPY RLARDIRGIG FRTADSIALR LGLARDAPQR LAAGVSYALQ KAMDEGHCGL PVERLVRLAA DLLEVAPDLV RVAAALVLRE GREVVADTLR GEPCLFLKGL HGAERAIAMR MVERATGAPP WPEIDFALAR PWVEAKTGKT LSASQAEAVG LVLRSKLCVL TGGPGVGKTS TLDAILRILT AKGVRVLLAA PTGRAAKRMA EQTGLEARTL HRLLEIDPRN GGFQRGEDNP LDCDLLVIDE TSMVDVPLMH AVLKAVPERA GLILVGDVDQ LPSVGPGQVL ADLIASGRVP VARLTEIFRQ AAQSRIVVNA HSINTGRMPV TAPKGEESDF YLVEIEDAEA GVETLIDLVT RRIPRRFGLD PARDIQVLTP MIRGSLGSRN LNHALQRVLN PSPPAQVERF GWRFAPGDRV METRNDYDRD VFNGDLGTVS AIDAEEEALV VDFDGRPVIY PFGELDTLVP AFATTIHKAQ GSEYPAVVIP VVTQHRTMLA RNLLYTGVTR GRRLVVLVGQ RRAVGLAIRE GAARRRWTKL REWLETA
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