Gene Mpop_0008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_0008 
Symbol 
ID6309003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp8864 
End bp11047 
Gene Length2184 bp 
Protein Length727 aa 
Translation table11 
GC content72% 
IMG OID642648721 
Producthelicase, RecD/TraA family 
Protein accessionYP_001922739 
Protein GI188579294 
COG category[L] Replication, recombination and repair 
COG ID[COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 
TIGRFAM ID[TIGR01448] helicase, putative, RecD/TraA family 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCGC CGGTGCGGCC ACCCGACCTC GACGTGTTGG CGGGCTCGGT CGAGCGCGTC 
ACTTTCCACA GCGCCGAGAC GGGATTCTGC GTCCTGAAGG TCCATGCCCG CGGCCGGCGC
GATCTCGTGC CGGTGGTGGG CCATGCGCCG GCCATTGCCG CGGGCGAGTG GCTGACGGCG
GCGGGCCGCT GGACCACGGA TCGCGAGCAC GGCCTCCAGT TCCGCGCCGA GACGCTCCAG
GTCACACCGC CGACCGGCAT CGAGGGGATC GAACGTTATC TCGCCTCGGG GCAGATGCGC
GGCATCGGCC CGATGATGGC CAAGCGCATC GTCGCGGCCT TCGGCGAGGC GGTGTTCGAG
ATCATCGAGG CCGAGCCCGC CCGCCTCACC GAGGTCGAGG GCATCGGCCG CAAGCGCGCC
GCCCGCATCG TCAAGGGCTG GGCCGAGCAG AAGGCGGTGC GGGAGATCAT GATCTTCCTG
CACGCCCACG GCGTCGGCAC CGCGCGGGCG ACCCGCATCT TCCGCACCTA TGGCGGCGAT
TCGCTGAAGG TCATGGCGGA GGATCCGTAC CGCCTCGCCC GCGACATCCG CGGCATCGGC
TTCCGCACGG CGGATTCCAT CGCACTGCGC CTCGGCCTCG CTCGCGACGC GCCGCAGCGG
CTCGCCGCGG GCGTGTCCTA CGCGCTTCAG AAGGCGATGG ACGAGGGCCA TTGCGGGTTG
CCCGTCGAGC GGCTGGTGCG GCTCGCCGCC GATCTCCTCG AAGTGGCGCC CGACCTCGTC
CGGGTCGCGG CCGCGCTCGT CCTGCGTGAG GGCCGCGAGG TCGTTGCCGA CACCCTGCGC
GGCGAGCCCT GCCTGTTCCT GAAGGGACTG CACGGCGCCG AGCGCGCCAT CGCCATGCGG
ATGGTCGAGA GGGCGACGGG AGCGCCGCCC TGGCCGGAGA TCGATTTCGC CCTCGCTCGC
CCCTGGGTCG AGGCGAAGAC CGGCAAGACG CTCTCGGCCT CGCAGGCCGA GGCGGTCGGG
CTCGTGCTGC GCTCGAAGCT CTGCGTGCTC ACCGGCGGTC CCGGCGTCGG CAAGACCTCC
ACCCTCGACG CGATCCTGCG CATCCTCACG GCCAAGGGCG TGCGCGTGCT GCTCGCCGCG
CCCACCGGCC GCGCCGCCAA GCGCATGGCC GAGCAGACCG GGCTGGAGGC CCGCACCCTC
CACCGCCTGC TGGAGATCGA CCCGCGCAAC GGCGGCTTCC AGCGCGGGGA GGACAACCCG
CTCGATTGCG ATCTCCTCGT CATCGACGAG ACCTCGATGG TCGACGTGCC GCTGATGCAT
GCCGTGCTCA AGGCGGTGCC GGAGAGGGCC GGCCTGATCC TCGTCGGCGA CGTCGATCAG
CTGCCCTCCG TCGGCCCCGG GCAGGTGCTC GCCGACCTGA TCGCGTCCGG CCGCGTTCCG
GTGGCCCGCC TGACCGAGAT CTTCCGCCAG GCGGCGCAGA GCCGGATCGT CGTCAATGCC
CACAGCATCA ACACCGGCCG CATGCCGGTC ACGGCGCCGA AGGGGGAGGA GAGCGACTTC
TACCTCGTGG AGATCGAGGA TGCCGAGGCG GGCGTGGAGA CGCTGATCGA CCTCGTGACC
CGCCGCATCC CGCGCCGCTT CGGCCTCGAT CCGGCCCGCG ACATCCAAGT GCTGACGCCG
ATGATCCGCG GCTCGCTCGG CAGCCGCAAC CTCAACCACG CCCTCCAGCG CGTGTTGAAT
CCCTCCCCCC CGGCGCAGGT GGAGCGCTTC GGCTGGCGCT TCGCCCCCGG CGACCGAGTG
ATGGAGACCC GGAACGACTA CGACCGCGAC GTGTTCAACG GCGATCTCGG CACGGTGAGC
GCCATCGACG CGGAGGAGGA GGCGCTCGTG GTCGATTTCG ACGGTCGGCC GGTGATCTAC
CCGTTCGGCG AACTCGACAC GCTGGTGCCG GCCTTCGCCA CGACGATCCA CAAGGCGCAG
GGTTCGGAAT ACCCGGCCGT GGTGATCCCG GTGGTCACGC AGCACCGCAC GATGCTCGCA
CGCAACCTCC TCTATACCGG CGTGACCCGC GGGCGCCGTC TCGTCGTGCT CGTGGGTCAG
CGCCGGGCGG TCGGCTTGGC GATCCGCGAG GGCGCGGCGC GGCGGCGCTG GACCAAGCTG
CGGGAATGGC TCGAGACCGC CTGA
 
Protein sequence
MNAPVRPPDL DVLAGSVERV TFHSAETGFC VLKVHARGRR DLVPVVGHAP AIAAGEWLTA 
AGRWTTDREH GLQFRAETLQ VTPPTGIEGI ERYLASGQMR GIGPMMAKRI VAAFGEAVFE
IIEAEPARLT EVEGIGRKRA ARIVKGWAEQ KAVREIMIFL HAHGVGTARA TRIFRTYGGD
SLKVMAEDPY RLARDIRGIG FRTADSIALR LGLARDAPQR LAAGVSYALQ KAMDEGHCGL
PVERLVRLAA DLLEVAPDLV RVAAALVLRE GREVVADTLR GEPCLFLKGL HGAERAIAMR
MVERATGAPP WPEIDFALAR PWVEAKTGKT LSASQAEAVG LVLRSKLCVL TGGPGVGKTS
TLDAILRILT AKGVRVLLAA PTGRAAKRMA EQTGLEARTL HRLLEIDPRN GGFQRGEDNP
LDCDLLVIDE TSMVDVPLMH AVLKAVPERA GLILVGDVDQ LPSVGPGQVL ADLIASGRVP
VARLTEIFRQ AAQSRIVVNA HSINTGRMPV TAPKGEESDF YLVEIEDAEA GVETLIDLVT
RRIPRRFGLD PARDIQVLTP MIRGSLGSRN LNHALQRVLN PSPPAQVERF GWRFAPGDRV
METRNDYDRD VFNGDLGTVS AIDAEEEALV VDFDGRPVIY PFGELDTLVP AFATTIHKAQ
GSEYPAVVIP VVTQHRTMLA RNLLYTGVTR GRRLVVLVGQ RRAVGLAIRE GAARRRWTKL
REWLETA