Gene Mpop_0002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_0002 
SymboldnaA 
ID6308997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp1161 
End bp2666 
Gene Length1506 bp 
Protein Length501 aa 
Translation table11 
GC content70% 
IMG OID642648715 
Productchromosomal replication initiation protein 
Protein accessionYP_001922733 
Protein GI188579288 
COG category[L] Replication, recombination and repair 
COG ID[COG0593] ATPase involved in DNA replication initiation 
TIGRFAM ID[TIGR00362] chromosomal replication initiator protein DnaA 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCTCG ACGGCAGCAT GGCGGACGGC GATGGCGGAA ACGGCAGGGG GAACACCGAC 
ATCCCCGCGG CCTGGACGCG GGTGAAACGG CGGCTGCGGG CGGAGCTCGG CGAGGACGTG
TTCGCGAGCT GGTTCGCCCG CCTCGAACTC GAGGATGTGG AGGGCGGTGT CGCCCGACTC
ACCGTGCCGA CCCGATTCCT CAAGAGCTGG ATCGAATCGC ACTATCTCGA CCGGGTTCTG
ACGACCTTCC GGGCCGAGGC CGACGGCGTG AGCCGCATCG AGGTCGGCGT GCGCGGTGCC
TCCGCTCCGG CGCGGCCGAG CGCCGGGACG CAGACGAAAC CGAATCCGAC GAGCGGGCCG
CTGACCCGGC TCCACGCGAC GGCGACCCCC GCCGCGCTTC AGGGCCCCGG CCCGATGGTG
GAGACCGAGA TCGCCGCGCC GCGTGGCGAA TCGGGCTCGG TCGATCTCAA CGGTGCTCCG
CTCGATGCGC GACTCACCTT CGCGAGCTTC GTGGTCGGCC GCTCCAACGC GCTCGCTCAT
GCCGCTGCCG AGCGGATCGC CCGCAGCGAC GGCGATGGCG CCCTCTACAA TCCGCTCTAC
GTCCATGCCG GCGTCGGCCT CGGCAAGACG CACCTGCTGC ACGCCGCCGG CCATGCCGCC
CGTGAGGCCG GGCGCCGGGT GATCTATCTC ACCGCCGACC GTTTCATGTA CGGCTTCGTC
AACGCCCTGA AGACGCAGAG TGCTCTGGCC TTCAAGGAGC GGCTGCGGGC CATCGACCTG
CTGATCCTCG ACGACGTGCA GTTCATCCAG GGCAAGTCGA TCCAGACCGA GTTCGGTCAC
ACCCTCAACG CCCTGATCGA TTCGGGCCGT CAGGTCGTGG TCGCCTCCGA CCGTCCGCCG
ACCGAGCTGG AGGCGCTCGA CGAGCGCGTG CGCTCGCGTC TGGCCGGCGG TCTCGTCGTC
GAGATCGGCG GCCTCGACGA AGGCCTGCGC GCCTCGATCC TCTCCGCCCG CCTCGACGCC
GTGCGGCAGA GCCACCCGAA TTTCGAGGTC TCGCCGGCCG TCTCGGCCTA CGTCGCCCGG
GCGATCACCG CCAACGGCCG CGATCTCGAA GGCGCGGTGA ACCGGCTGCT GGCCCATGCC
ACGCTGACCG GCGCGCCGGT CACCGTCGAG ACCGCCGAGA CCGCGATCCG CGACCTCGTC
AAGAACCGCG AGCCGAAGCG GGTGAAGATC GAGGACATCC AGAAGCTGGT GGCCTCGCGC
TACAACGTCT CGCGCTCCGA CATCCTGTCC GAGCGTCGCA CCGCCGCCGT GGTGAAGCCG
CGCCAGATCG CAATGTATCT GTCGAAGGTG CTGACGCTGC GTTCGCTTCC CGAAATCGGC
CGCCGCTTCG GCGGACGCGA TCACACCACC GTGCTGCACG CGGTGCGCAA GATCGAGAAG
CAGATCGGCG AGGACGCGGT GCTCGGCGAC GAGGTTGAGC TGCTGAAGCG CATGCTGCAG
GACTGA
 
Protein sequence
MHLDGSMADG DGGNGRGNTD IPAAWTRVKR RLRAELGEDV FASWFARLEL EDVEGGVARL 
TVPTRFLKSW IESHYLDRVL TTFRAEADGV SRIEVGVRGA SAPARPSAGT QTKPNPTSGP
LTRLHATATP AALQGPGPMV ETEIAAPRGE SGSVDLNGAP LDARLTFASF VVGRSNALAH
AAAERIARSD GDGALYNPLY VHAGVGLGKT HLLHAAGHAA REAGRRVIYL TADRFMYGFV
NALKTQSALA FKERLRAIDL LILDDVQFIQ GKSIQTEFGH TLNALIDSGR QVVVASDRPP
TELEALDERV RSRLAGGLVV EIGGLDEGLR ASILSARLDA VRQSHPNFEV SPAVSAYVAR
AITANGRDLE GAVNRLLAHA TLTGAPVTVE TAETAIRDLV KNREPKRVKI EDIQKLVASR
YNVSRSDILS ERRTAAVVKP RQIAMYLSKV LTLRSLPEIG RRFGGRDHTT VLHAVRKIEK
QIGEDAVLGD EVELLKRMLQ D