Gene Nther_2955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_2955 
Symbol 
ID6317225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010724 
Strand+ 
Start bp3199 
End bp3762 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content32% 
IMG OID642648708 
Productintegrase family protein 
Protein accessionYP_001922726 
Protein GI188587530 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones82 
Plasmid unclonability p-value0.819146 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCATG TTTCTCCGAT TAAAGATTTA AAAAAAATAG ATCACATAAA GCGAATTTTA 
AAACAAAAAA ATAAGCGAGA CTACTGCCTA TTTGTGTTAG GGATTAATAC AGGTTTACGT 
ATATCAGATT TACTAGAACT TAAAGTTTCT GATCTCGTAG ATGAAAATGG TAAACCAAAA 
AAGAATTTGG AACTGAAAGA AAAGAAGACC GGAAAAAATA AACAAATGAT TCTTAATGAG 
AAAGCAAGAT CAGCAATTCG TGAGTACGTT CAGGATTCAA AATTAAGTCT TAATGATAGT 
ATTTTTAAGA GTCAAAAAGG TGGACCGATT AGTCGCGAAC ATGCTTATAG AGTAATCAAT 
GAAGCTGCTA AGGCGGTAGG AATAAAGGAA AGGGTCGGGA CTCATACTTT GAGGAAGACG 
TTCGGCTATC ATGCTTATAT CAATGGCGTT GATATATCTC TGATACAAAA CATTTTTAAT 
CATTCAGCTC CATCTGTAAC TTTGAGGTAT ATTGGTATAG AACAAGAAGA TATAGACGAT 
GTGTATATAA ATATTAATCT CTGA
 
Protein sequence
MNHVSPIKDL KKIDHIKRIL KQKNKRDYCL FVLGINTGLR ISDLLELKVS DLVDENGKPK 
KNLELKEKKT GKNKQMILNE KARSAIREYV QDSKLSLNDS IFKSQKGGPI SREHAYRVIN 
EAAKAVGIKE RVGTHTLRKT FGYHAYINGV DISLIQNIFN HSAPSVTLRY IGIEQEDIDD 
VYININL