Gene Mpop_5467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_5467 
Symbol 
ID6308669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010721 
Strand
Start bp19674 
End bp20834 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content69% 
IMG OID642645329 
Producthypothetical protein 
Protein accessionYP_001919459 
Protein GI188579280 
COG category[R] General function prediction only 
COG ID[COG4653] Predicted phage phi-C31 gp36 major capsid-like protein 
TIGRFAM ID[TIGR01554] phage major capsid protein, HK97 family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCATGC ACGTTGCGGC GCTCGAAGGC GCCCCCATCG AGTTGAAGGA CGCCGAGGGC 
GAGACCGACG CGGCCGAGGC CGTCGCAAAG GCTCTCGGCG AGATCGAGAC CAAGCTCAAC
GCCCGCTTCG ACGCCATCGA GACCAAGAGC GCCGACCGGC TCGACCGCCT TGAGGCACGC
CTCAACCGCC CCGGCCTGTC CGCCCCGAAG GCCGACGACG CCCCGGCCGG CGACATCGAG
CGCAAGGCGT TCACCGGCTA CCTGCGCGCC GGCCCCAACG GTCTCGGCGC CGAGGAGAAG
AAGGCGCTCA GCGTCGGCGT GCAGACGGCC GGCGGCTACC TGGCGCCCGA TCAGTTCACG
CTCGACTTCG TGCGCGACCT GACCCTGTTC TCGCCGATCC GCGGCATTGC GGACGTGCGC
AACACCTCCT CGCACACCGT GCTCTACCCG AAGCGCACGG CCATCACGAA CGCCCGCTGG
CAGGGCGAGG CTCAGCCCAC GACCGGCAGC GAGCCGGCCT TCGACCAGGG CGAGATCGAG
GTGAAGAACC TCGCCACGCA CACCGACATC AACAACCAGC TCATCGACGA TGCCGTCGTC
GATATCGAGG CCGAGGTGCG GCTCGCCCTG GCCGAGGATT TCGGCGTGAA GGAGGGCAAG
GCGTTCGTCT CCGGCGACGG CGTGTTGGAG CCCGAGGGCT TCATGACCGC GGCCGGCGTC
CCGGTCACGC TCAACGGCCA CGCCTCGAAC CTCTCGACGG ACCAGCTTAT CGCCATGCTC
TACAGCCTGG CGCCGGCTTA CCGCTCGGCC GCGACGTGGG TGATGAACGG CAACACCCTG
GCCGTCATCC GCAAGCTGAA GGACTCGCAG GGCAACTACC TGTGGCAGCC GGGCCTTGTC
GCCGGCCAGC CCGAGACGAT CCTCGGCCGC CCTGTCGTCG AGGCCGTCGA TATGGCCGAC
GTGGGCGCCA ACGCCTTCCC CATCGCGCTC GGCGCCTTCA AGGCCGCCTA TCGCATCTAT
GACCGCAAGG CCATGGAAGT GAAGGCGAAC CCGTTCCTGC TGATGACGCA GGACCAGACC
CGGTTCCACG CCTTCCGCCG CACTGGCGCC GCCGTGGTGC AGCCGGCCGC CCTCCGCAAG
CTCAAGATGG CGACCTCGTA A
 
Protein sequence
MTMHVAALEG APIELKDAEG ETDAAEAVAK ALGEIETKLN ARFDAIETKS ADRLDRLEAR 
LNRPGLSAPK ADDAPAGDIE RKAFTGYLRA GPNGLGAEEK KALSVGVQTA GGYLAPDQFT
LDFVRDLTLF SPIRGIADVR NTSSHTVLYP KRTAITNARW QGEAQPTTGS EPAFDQGEIE
VKNLATHTDI NNQLIDDAVV DIEAEVRLAL AEDFGVKEGK AFVSGDGVLE PEGFMTAAGV
PVTLNGHASN LSTDQLIAML YSLAPAYRSA ATWVMNGNTL AVIRKLKDSQ GNYLWQPGLV
AGQPETILGR PVVEAVDMAD VGANAFPIAL GAFKAAYRIY DRKAMEVKAN PFLLMTQDQT
RFHAFRRTGA AVVQPAALRK LKMATS