| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_5452 |
|---|
| Symbol | |
|---|
| ID | 6308676 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010721 |
|---|
| Strand | + |
|---|
| Start bp | 3459 |
|---|
| End bp | 6749 |
|---|
| Gene Length | 3291 bp |
|---|
| Protein Length | 1096 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 642645314 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001919444 |
|---|
| Protein GI | 188579265 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01541] phage tail tape measure protein, lambda family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAGG CAGCGGAAAG CTCGTCGGGC GATACGGAAC AGCTTGTTGT TCTTCTCGAA
GCGCGGATGA ACGACTTCGA GCGCAACATG AAGCGGGCGG CGCGGGCGGC CAACGAGAAC
TTCGGCTCCA TCGAGGAGCG GAGCAAGCGC ACCGCAAAGA CGGTCGAGGA GCAGTTCGCC
CGGAGCGGTC GGACGGTGAA GGGGCCGACC CTCGACACGT CCGACCTCGA AAAGGGCGCC
AAGCTCACCA CGCAGCAGTT CGTCATCCTG AAGGCCGCGG CCACGGACGC CTTCGGCTCT
CTCTCGGCCG GGCAGTCGCC GTTGACTGTG CTCACGCAGC AGGCCGGGCA GGTGGCGAGC
GCCATCGGCG AGGATGGCGT GCTCGGGCTC CTCGGCGGTG TCGGGAACGG GCTGAAGGGG
CTCATCACGC CCACGGTCGC AGCGACCGGC GCCGTCGTCG CGTTCGGCGT CGCCGCGGCC
TACGCCTTCA GCCGCTACAC CGACGAGCGC CTGGCGACCG AGCTCGCGCT CACCGGCATC
GGCCGCGCCT CTGGCATCAC CGCGGACCAG ATCGCCGGCA TGGGCGAGGA GATCGCCAAG
GCGTCGGGGA TCTCCAATGC CTCGGCCCGC GACATCGCCG TGTCGCTCGC GGCCACGGGC
AAGGTGACGG CCGACAACCT GGCCGACGTG GGATCGCTCG CGAAGGGCTA CGCCAAGCTG
TTCGGGACCG ACATGACCGA GGCCGGGAAG GAACTCGCGG CCATCTTCGG CGGCGACCTG
GCCGCGGGCG CCGACAAGCT CGACGGGCGC CTCGGGATGC TCGACGACCG GACGCGCCAG
TATATCAAGA GCCTCGTCGC GCAGGGCGAG CGGCAGAAGG CCATCAACGT GCTCGTCGAG
GCCGTGCGCC CGCAGCTTTT GAAGGCGGCC GAGGCGACGA GCATTTGGGC GAAGGCGTGG
GGCGCCGTGA AGGACGGCGC GGACTCCGCA GCCGTCAGCG TCGGCCGCGC CATCGACAAG
GTAGTGACCG GCCCGAGCCC GCAGGACCGG CTTGAGCAGC TTCGGGCGCA GCGGGCCGAG
CTCGAAGCAC GCCGCACCGC CCCGGTGCAG GTGTTCGGTA ACGGCGGCCT GAAGGTCGGG
CGTGACGCTC TCGACGATGG CGGCCTGAAG CCGCTCCCGC AGTTGGACGG CACCTCGCCG
GAAGCCGCCG GGGCCGTCCT CAAGGCCGAC CTGAAGCTCC TCGAGGAGCA GATCAAGGCG
ACCGAGGATT TGATCGTCGC CGAGGAGCGG CGCCGCCAGG CCGCGGCCGA GGATGCGCGC
ACGAACGACG CCTCGAAGCT CGCGGGCGAG ATCACGCGCG CCTTCAACGA GGAGGCCGAG
GCCATCAGCA TCCTTGAGGA GCGCTACACC GCCCTCGGGA AGGTGCTGGC CGATCCCGGC
GCCGTCGCGA AGCTCGAAGA CGCCGACAAG GCGAAGACGA CCTATGAGGA GCTCGGGAAG
CGCGTCGCGG CCCTGAAGGA AGAATACCGC ACGGGCGGCC AGGCCGCGGC GCAGGCTCTC
CGGGCGGCCA ACTTCGCCAA CGCGACCGCG GGCCTCGACG CCTACCGGAA GGGCCTCGCG
GCCATCAACG AAAAGTTCGA GGAGCAGATC AGGCTTGCCC GGCTCTCCGG CGACGCCGCG
ACGACGGCCG CGCGGATCGC GACCATCGAG GCCACGCGCG CGGCCGAGGT TCGCACCTAC
AAGGTCGAGG CCGAGGAGCG CGCTCAGAGC TCGCTCAACC TCCCGTCCGA CTATGCGGCC
GGTGTCGTCG CAGCGGAGTC GGGCGGCAAC ACGAACGCGA AGAACTCCCG CTCCTCGGCG
ACCGGCCTGG GGCAGTTCAT CTCCGGGACC TGGCTCAGCC TGTTCAAGAA GGTCTTCGCC
GACCAGGCCG CGAGCATGTC CGACGAGGCC ATCCTCGCCC TGCGCACGAA CCGGGAATAC
TCTCTCAGGC TCATTGAGTC GTATGCCCGT GAGAACGGCG TCGCCCTTCA GCGTGCCGGC
TTCGACGCGT CGAGCGCGAA CCTCAACCTG GCTCACTTCC TCGGGTCGGG CGGCGCGATC
AAGATGCTCA AGGCCGACCC GAGCGCGAAC GCGGCCTCGA TCCTGCCCGA CGCCGCGGCG
GCCAACCCGG AGGTGTTCAA GCGCGGCGGC GCGTCCGTCG CCGACATCCT GGCGTATGCG
GAGCGCCGGG CGCAGCGGGG CGGCTCCTCG GGCCGGGCGC AGTCCGAGCG CATCACCGCT
CTCCGGGCCG AGAGCGAAGC TTACGCCAAG TCGGCCGTCG AGGCGGAAAA GCTCAAGTCC
GTCGAGGAGC AGCTTGCCGC CGACCGCGAG CGGGGCGGGG AGCTCGGGAA GCAGTTCGCC
ACGGCGACCG ACCTCATCAA GGCGTCGTCG GACAAGCTCA CGCCGGCCCT GAAGGCGCAG
CGCGACGAAG TGCTCGCCCT GGCCGAGGCC CGCGCGAAGG CGGCGCAGAC TGGGTTGTCG
GCCCGCTTCG ATATCGACAT GGCCGAGGCC CGCGCCGCCC TCGGCCGCAC GTCGAGCGAG
AACGCCGCCC GCGCGACGGC CCGGAGCTAC GGCTTCGACC TGTCGTCCGA CGCGGGGAAG
GCGGCCACGG CCACGGCGCA GTTGAACGCG ACCCTGGCCG AGACCAAGGG CCTCGCGACG
AACGCGCTTT CTGGCTTTGC CAGCGACATG CTCCGGGGCG CGAGCGCGGC CGACGCCCTG
CGCAACCAGC TCATGCGCAT CGCCGACGTG CTCATCAACA AGCTGTCGGA GAACTTGATC
TCCTCGCTGT TCGGCGGCCT GTCGGGCGGC TCCTCCATCG GCATGGGCGC GGGTGGCCTC
GGCGGCCTCT CCAAGCTGTT CGGCGGCTTC GCCGAGGGCG GCTACACGGG CGCGGGTGGG
AAGTATGAGC CGGCCGGCAT CGTCCACCGC GGCGAGTTTG TGATCCCGGC CAACGTGGTG
AAGCGCATCG GCGTGGGGAA CCTCGAAGCG CTGCGCCGGG GCTACGCGAA CGGCGGCCTT
GTCGGGGCGC CCTCGATCCC GCGCGCGTCC CTCGGCGGCT CGGGCGCCGC GGCCGGCTCG
CGTGTGGTGA CGATCGCGCC CGTCATCAAC ATGAACGCGC AGGGCGGCGA CCCCTCGCAG
AACGCCGACC TGGCGTCGCA GACGGCGAAG GCGGCCGAGG GTATGATCCG CAGCCTTGTC
GTGAGGGAAC TCCGCGACCA GATGAGGCCC GGAGCTATGC TTAATCAGTA G
|
|---|
| Protein sequence | MAKAAESSSG DTEQLVVLLE ARMNDFERNM KRAARAANEN FGSIEERSKR TAKTVEEQFA
RSGRTVKGPT LDTSDLEKGA KLTTQQFVIL KAAATDAFGS LSAGQSPLTV LTQQAGQVAS
AIGEDGVLGL LGGVGNGLKG LITPTVAATG AVVAFGVAAA YAFSRYTDER LATELALTGI
GRASGITADQ IAGMGEEIAK ASGISNASAR DIAVSLAATG KVTADNLADV GSLAKGYAKL
FGTDMTEAGK ELAAIFGGDL AAGADKLDGR LGMLDDRTRQ YIKSLVAQGE RQKAINVLVE
AVRPQLLKAA EATSIWAKAW GAVKDGADSA AVSVGRAIDK VVTGPSPQDR LEQLRAQRAE
LEARRTAPVQ VFGNGGLKVG RDALDDGGLK PLPQLDGTSP EAAGAVLKAD LKLLEEQIKA
TEDLIVAEER RRQAAAEDAR TNDASKLAGE ITRAFNEEAE AISILEERYT ALGKVLADPG
AVAKLEDADK AKTTYEELGK RVAALKEEYR TGGQAAAQAL RAANFANATA GLDAYRKGLA
AINEKFEEQI RLARLSGDAA TTAARIATIE ATRAAEVRTY KVEAEERAQS SLNLPSDYAA
GVVAAESGGN TNAKNSRSSA TGLGQFISGT WLSLFKKVFA DQAASMSDEA ILALRTNREY
SLRLIESYAR ENGVALQRAG FDASSANLNL AHFLGSGGAI KMLKADPSAN AASILPDAAA
ANPEVFKRGG ASVADILAYA ERRAQRGGSS GRAQSERITA LRAESEAYAK SAVEAEKLKS
VEEQLAADRE RGGELGKQFA TATDLIKASS DKLTPALKAQ RDEVLALAEA RAKAAQTGLS
ARFDIDMAEA RAALGRTSSE NAARATARSY GFDLSSDAGK AATATAQLNA TLAETKGLAT
NALSGFASDM LRGASAADAL RNQLMRIADV LINKLSENLI SSLFGGLSGG SSIGMGAGGL
GGLSKLFGGF AEGGYTGAGG KYEPAGIVHR GEFVIPANVV KRIGVGNLEA LRRGYANGGL
VGAPSIPRAS LGGSGAAAGS RVVTIAPVIN MNAQGGDPSQ NADLASQTAK AAEGMIRSLV
VRELRDQMRP GAMLNQ
|
|---|
| |