| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_2885 |
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| Symbol | |
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| ID | 6315710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010718 |
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| Strand | - |
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| Start bp | 3114515 |
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| End bp | 3116632 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 642645256 |
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| Product | penicillin-binding protein, 1A family |
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| Protein accession | YP_001919020 |
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| Protein GI | 188587475 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.060613 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.0841224 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGGCGCA AAAGATCGCC ATCAAAAGAA CAATACCTAG AGAACAAAAA AAGACCGGGC
TTTATTAATA TATTTAAAAA AATTTTCAAA TTGCTGTTTA TTGTAGCAAT TATTTCTGTC
ATTGGATTTA TTATCTTATT ACCAGTTGTA GTATCTGCTT TAGAAGATGT CTCGCCTCCT
GAATTTGAAA GTGCTACTGT TATGTTAGAT AAAAATGGAG AGGAATTCTA TCATGAGTAC
GATGATTATC GGATTTATAT TTCAATAGAT GAAATGCCAG AAGAAATGGT AGAAGGGATC
ATGGCCGTAG AAGACAGGAG GTTCAAGGAA CACTTAGGAA TAGATATAAG AGGTATAACT
AGGGCTATGT GGCGTAATAT TAGAGCCAGA GAAGTCGTCG AGGGTGGTAG TACTATTACC
CAACAATTAG CTAAAAATTA CTTTTTAGAT CATTCCAGGA CAATAGATAG AAAAGTTCGA
GAATTTTTCT TGACTTTGCA TCTAGAAAGG ACATTGAGTA AAGAGGAAAT TTTGGAACAG
TATTTAAACG GTATCTATTT CGGCCATGGA GCTTATGGTG TAGAAGCTGC CAGTAGAATG
TATTTTGGAA AAAATACCAA TGAATTAGAG CTTCAAGAGA TTGCTATGTT AATTGGAATA
CCGAGAAGTC CCTATTATTA TTCACCATTT CGAAATCCAG AAAATGCTCA ACAAAGACGT
GATGCAGTCT TACATATAAT GGCTCAAGAA GGAGTGGTTA ATCAGGACAC AGCTCAAGCA
GCTGCTGTTG AAGCACTAGA TGTTACTGGA TATAATCCTC CCAAGGAAAA TGCTTCTTAT
TTTGCAGATG AGGTTAACAG GCGACTAGAA GAGAAATTGC CAGAAGATTA TACAGAAGAT
TTTCAAAGGG GAGGCTTTCG TGTATATACT ACTTTAGATC AGGAAATGCA GTCAGAAGCT
GAAAGAATTT TAGATGAAGA CTTGGGAGTA GTCAGATATG CTGAAAGAGG GGATTCGGAA
ATTCGTCAAC CACAAGGTTC TATGGTAGCA TTGGAGCCTG ATACCGGTAG GGTGAGAGCT
TTCGTAGGTG GTCGGGACTA TGAAGAAACC CCTTTCAATC GAGCTAATCC TATTAGTCCT
AATAGACCAG TTGGTTCTAC GATTAAACCA TTTGTATATG CTGCAGCTTT ATCGGAAAAT
GAAATCACAC CTGCTACTAC CTTTACTTGT GAGGAAACTG TATACCCAGA GGAACCGGGA
TGGGATAATG GCCCCTTCGT ACCTACTGAT TATGGCGGTG TTTACCATAA TGATGACCTG
ACAATTCGCA GAGCAATTCG GGAATCGTGT AATGTAACTG CTGTTAAAGT TCATGATGAT
ATGGGGCGGT ATCCTAGTGT GGAGCAGGCT GAAAGTATGG GAGTAATTGA CGATATTCCA
ACTACCCTTT CCTTTCCTCT AGGACAGGTC GAAGCTTCGC CTTTAAAACT TACATCAGGA
TATACACCTT TTGCCAATGA AGGAATTTTG GTAGAACCGA AACTGATAAA AAAGGTTGAA
GATAGTAGGG GCACAGTTAT CTATGAAAAT GAGCCAGAGC GGTCAGTAGA GCTGAGTCAA
CAAACAGCTT ATCAAATGAC CAGTATAATG GAGGATGTGA TTTCTCCTAG AGGCACGGCT
TCAAGTATAT GGGATGAAAT TGATTTTCCA GCTGCCGGGA AAACAGGCAC AACGGAAGGC
CGAATGGATG CAGTTTTTGT AGGTTATACC CCCGAACTAG TAACTACTGT ATTTGTAAGT
GATGATGGCA ATGTAGAACC CGTTCCCGGA ACTGGAGGGA GTTTAGCTGC ACCTCTTTGG
AGTGAATTTA TGAATTCTGT TTCTCATAAA TTGGATCATG AAGACTTTTC TCGTCCTGAT
GGACTAATTG AACGTGAAAT CTGTGAAGAT TCGGGGAAAC TAGCAACAGA TTATTGTCCT
GAAGAAGTAG TAACAACTGA ATATTTTGAA CCGAGAACCC AACCCGATAA TGATTGTGAT
GTACATTTAC CAGAAAAAGA GGAAGGCCCT GGCTTTCCTC CTCCTTGGTG GCCATTTTTT
CAAGAAGATA ACGATTAG
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| Protein sequence | MRRKRSPSKE QYLENKKRPG FINIFKKIFK LLFIVAIISV IGFIILLPVV VSALEDVSPP
EFESATVMLD KNGEEFYHEY DDYRIYISID EMPEEMVEGI MAVEDRRFKE HLGIDIRGIT
RAMWRNIRAR EVVEGGSTIT QQLAKNYFLD HSRTIDRKVR EFFLTLHLER TLSKEEILEQ
YLNGIYFGHG AYGVEAASRM YFGKNTNELE LQEIAMLIGI PRSPYYYSPF RNPENAQQRR
DAVLHIMAQE GVVNQDTAQA AAVEALDVTG YNPPKENASY FADEVNRRLE EKLPEDYTED
FQRGGFRVYT TLDQEMQSEA ERILDEDLGV VRYAERGDSE IRQPQGSMVA LEPDTGRVRA
FVGGRDYEET PFNRANPISP NRPVGSTIKP FVYAAALSEN EITPATTFTC EETVYPEEPG
WDNGPFVPTD YGGVYHNDDL TIRRAIRESC NVTAVKVHDD MGRYPSVEQA ESMGVIDDIP
TTLSFPLGQV EASPLKLTSG YTPFANEGIL VEPKLIKKVE DSRGTVIYEN EPERSVELSQ
QTAYQMTSIM EDVISPRGTA SSIWDEIDFP AAGKTGTTEG RMDAVFVGYT PELVTTVFVS
DDGNVEPVPG TGGSLAAPLW SEFMNSVSHK LDHEDFSRPD GLIEREICED SGKLATDYCP
EEVVTTEYFE PRTQPDNDCD VHLPEKEEGP GFPPPWWPFF QEDND
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