Gene Nther_2834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_2834 
Symbol 
ID6316492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp3066938 
End bp3067780 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content43% 
IMG OID642645205 
Productprotein of unknown function DUF1078 domain protein 
Protein accessionYP_001918969 
Protein GI188587424 
COG category[N] Cell motility 
COG ID[COG4786] Flagellar basal body rod protein 
TIGRFAM ID[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones77 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTACGTG GTTTATATAC ATCCTCATCA GGAATGCTTA CCCAGCAAAG AGTTCAGGAA 
GTGAAATCAA ATAATATGGC AAATTTAAAT ACTACAGGTC ATAAAAGGGA TATGTCGGTT
AAAAGTGAAT TTTCAAACAT GTTGATCAGC CGGATAAATG ACCCAGAAAA TATAGGTCCA
CCACAAAGTC CACAAGTAGA TAATCGACCT TATATAGGTG AGTTGGGAAC AGGAGTACTA
TTAGATGAGA CGGTGAAAGA CTTTTCTCAG GGACCTCTGA AGGAGACGGG TAACACCCTG
GACCTTGGCC TGGAGGGCGA CGGATTCTTT ACAGTTAACG GCCCTGATGG TGAAGAATAT
TTTACTAGAA GCGGGGCATT AACATTATCC TATGATGAAA CTTCTGAAGA AGCTACCCTT
GTAACCCTCC AAGGTGATCC CGTATTGGGA GAGGAGGGGA TTATCCAACT CTCTGGAGAA
AAGGACATCA CCGTAACTGA AAATGGGGCG ATATATCAAG GGCAAGACGA TGAGGCTGAA
CTAATAGACA ACCTTGCTTT AGTGAACTTT GAAAACCCTC AAGGCCTAGC TCGCTACGGT
GATAATTTAT TAGAACAAAC TGAAGAATCT GGTGCCCCAC AAGAATTAGA TTTAGACGGA
GAAGATTTTG GTATACTATC CGTACATCAA GGGAAGATCG AAAGTTCCAA TGTAAATTCG
GTTGATGAGA TGACGGGTAT GATAAATGCA TTAAGGGCAT ATGAATCGAA TCAGCGGGCA
ATTCAGGGCC ACGATGATAC CCTGGAGCGA GCTGTTAACG ATATAGGTAG ACCCGTTACA
TAA
 
Protein sequence
MLRGLYTSSS GMLTQQRVQE VKSNNMANLN TTGHKRDMSV KSEFSNMLIS RINDPENIGP 
PQSPQVDNRP YIGELGTGVL LDETVKDFSQ GPLKETGNTL DLGLEGDGFF TVNGPDGEEY
FTRSGALTLS YDETSEEATL VTLQGDPVLG EEGIIQLSGE KDITVTENGA IYQGQDDEAE
LIDNLALVNF ENPQGLARYG DNLLEQTEES GAPQELDLDG EDFGILSVHQ GKIESSNVNS
VDEMTGMINA LRAYESNQRA IQGHDDTLER AVNDIGRPVT