Gene Nther_2827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_2827 
Symbol 
ID6316735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp3057569 
End bp3060694 
Gene Length3126 bp 
Protein Length1041 aa 
Translation table11 
GC content38% 
IMG OID642645199 
Productacriflavin resistance protein 
Protein accessionYP_001918963 
Protein GI188587418 
COG category[V] Defense mechanisms 
COG ID[COG0841] Cation/multidrug efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones78 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTTTAT CGCGTCTTGC AGTAAAACGA CCAATAGCTA CTATTATGGT ATTATTAGCC 
GTATTAATAT TAGGATTTTT AATATACCCT CGATTACCAT TAAACCTACT TCCTCAAATG
AATTATCCTA TGGCGGTTGT AGTGACTCAA TATCCAGAAG CAGGTCCTCA GGAAATTGAA
AATATGATTA CGAGACCCAT GGAGGAGATG GTTGGTACAA CGGCTGGAAT AGAAAATATT
TCATCTCGAT CCTATGAAGA ATTGTCCATG GTTATGGTAG AATTTTCCTG GGGGACTGAT
ATGGATTTTG CATCACTGGA AATGAGAGAA AGAATAGACA CTGTTAGGGA GAATTTACCA
GAAGGAGCTG AATCCCCTCA AGTCGTTAAA GTAGATCCAT CCTTGATGCC AGTTATGTTT
GTAAGTGTGG GACTGGAAGA AGCAGAAGGA GAACACCGAG ATTTAATAGA TTTAGAACAC
CTGGTTTCAA ATCAAGTGGT TAATCGTTTA AAAAGAATTG ATGGTGTGTC ATCTGTAGAA
CTTTCTGGTG TAGGTGAAAG GGAAATAAGA GTTGATTTAA ATGAAGATCA GATGGAAAAA
TATGATTTAA ATTCTCAAGA AGTTTACGGG ATACTATCAG GACAAAATAT CAATGTGCCA
GGTGGAAGAA TTGTGGAAGA AGAACAGGAG CTTTTGGTGA GATCTGTGTC AGAATTCAGT
AGTCTTGATG AACTTGAAGA AACCACTGTT GGGATAAACA CACCTGATTT TCCAGGAGAA
ACTAGCAATG GCTTAAATGA TTCATTTTCC TCTGGCGATG AGTTACCTGC TGATCAGAAT
CCAGAGGTTT CTACCGAATT TTCGACTGAT AGAAGGCAGG GAGAAGAGTT TTCTGGTGAT
TATGGAGAAC CAGTATATTT AGATGATATA GCAGATATTA GAGATGAGTA TCAAAGGGAA
AGTTTAGTTC GTCTCAATGG AGATAAAGCT TTGGGATTGA TTATCCAAAA ACAATCTGAC
GCAAATACAG TTCAAGTTAC CAGAAATATT AATGAAGAAT TGGCCAAAAT TCAGGGTGAA
TACCAAGAAC TTAATTTAGT ACCCACCTGG AATCAAGGCA ATTTTATTGA AGAAGTGCTT
TCAATGGTAC AACAAAATGC CGTTTTAGGA GGATTTTTGG CTGCCCTGGT ACTATTTGTG
TTTCTAAGAA ATTATAAAAG TACCCTCATA GTAGCCATTA GCATTCCAGC ATCTATTCTA
GCCACTTTTC CTCTAGCTTA CTTTACGGGG CTATCTCTCA ATATAATGAC ACTATCGGGA
TTAGCTCTAG GGATAGGAAT GTTAGTAGAT AATTCAGTTG TGGTTCTAGA AAATATTTTT
AGACACGTAG AACAGGGAAA ACAAATTAAA GAAGCAGCTA TCACGGGGAC AGAAGAAGTT
AGTTCTCCCA TAATCGCATC AACTTTAACT ACTATTGCGG TTTTTCTACC TGTATTTTTA
TTAGAAGACC TAGCAGGTAT TATTTTTGCA GATTTGTCCT ATATGGTAGT TTTTTCGCTT
GCCATGTCGT TATTTACAGC TTTAACGGTT ATTCCTGTAC TCTCAGTGTT ATTAATTGGG
CATAATCAAG CCATTTCAAA GTTCATACCC ATTGAAAATT TGAAAAAACG ATATAAAAAA
AGCCTGCACT ATCTATCGAA AAAAGGAAAA TATGTTTTAG GTGGAGCTAT TATATTAATG
GTAATATCCT TTACTTTGCT CCCAAATTTG GGTGGAGAAT TTTTACCACC CATAACTAGA
TCCGAATTTA CAGTAGACGT ACGATTACCA CCCGGAACTC ATTTGGAAAC CACAGAAGAA
GTTGTTACAG AAGTAGAACA ATATCTTTTA GATGAGGAAG AAGTTGACTC TGTATACGCA
ACCATAGGTG AGCGAGCTAG TCAAAGAGAA GGAGCAGGGT ACACTCAAAG AACTCCCCAT
CGCGGTGAAT TGATGGTGAT ATTGGAAACA GATGAGCAAG AAAAACTTGC CCAACAAGTT
GAGAGTGAAT TTTACGATCA TGACCAGGCC TCAATTAGCG CTTCCGAGAT GGAGGGAGAT
TTAGAGATGG GTGGTGATGC TATTGAAATT GACTTAATCG GTCCAGAACT TGACACACTG
AGGGAACTGT CTCAAGATAT AGCTAATGAA GTTTCTGAAT TAGAAGTTGT TTCAAATGTT
TCGAGAAACT TACCTACACC CAGACCAGAA CTACAGGTTT CTCCCAAAGA CGAACAAAGC
ATGTTAAAAG GAATTACTCC CATTCAAATG TCTCAAGACT TAGAAACTGA TTTAACAGGA
AGAAGAGCAA CAATTTTTAG AGAAGATGGT AGAGAGATCC CCATAGTATT AGGTTACTTT
AGCGAAGGAC CTGAGTCTAC TGAAGAAATA AAAGAAAAAT ACCAGGATAT TGCCACAGTT
GAAAAAGAGC CAGGCCCTAC GGTTATCAAT CGACAGGACG GTCAGCGCTA TGTAACAATT
TCAGCCGATT CGGAAACAAG AGATGTTCGG GGAGCGGTAA ATAGTATCCA AGATAGATTA
GATAATGTGG ATATCCCGCA AGGTTATCGC CTAAATTATG GGGGCGCTTA CGAGGATATG
TGGTCCTCAT ATTTAGAGCT AGGTGGAGCT TTGGCTTTAT CTTTGTTGCT AGTATTTATG
GTCATGGCAG GTCAATTCGA ATCTTTACGT TATCCTCTTG TTATTATGGT CAGCATACCT
TTTTCTTTTG TAGGTGTAAT TCTAGCACTA TATATTTTGA ATGATACTTT AAATGTGGCA
TCAATAATGG GGGTTATTAT ACTTTCAGGA TTAGTTGTTA ATAATGCTAT TGTTTTAGTG
GATTGCATTA AACGGGAAGA TAGTGTCCTT GAAGGTGCTT CCCTTAGATT GAGACCCATT
TTGATGACTA CTATTACTAC CTTGTTGGCA TTAATTCCCA TGGCTATTGC CGTTGGTCCT
GGGTCTGAAA TTCAAAACTC TTTGGCTTTT TCTCTTATAG GTGGATTGTT TAGTGCTACT
CTACTAACAT TAGTGATACT GCCTTTAGTA ATCATCTGGA TTAAATCTAG ATTTAATCTA
GATTAG
 
Protein sequence
MSLSRLAVKR PIATIMVLLA VLILGFLIYP RLPLNLLPQM NYPMAVVVTQ YPEAGPQEIE 
NMITRPMEEM VGTTAGIENI SSRSYEELSM VMVEFSWGTD MDFASLEMRE RIDTVRENLP
EGAESPQVVK VDPSLMPVMF VSVGLEEAEG EHRDLIDLEH LVSNQVVNRL KRIDGVSSVE
LSGVGEREIR VDLNEDQMEK YDLNSQEVYG ILSGQNINVP GGRIVEEEQE LLVRSVSEFS
SLDELEETTV GINTPDFPGE TSNGLNDSFS SGDELPADQN PEVSTEFSTD RRQGEEFSGD
YGEPVYLDDI ADIRDEYQRE SLVRLNGDKA LGLIIQKQSD ANTVQVTRNI NEELAKIQGE
YQELNLVPTW NQGNFIEEVL SMVQQNAVLG GFLAALVLFV FLRNYKSTLI VAISIPASIL
ATFPLAYFTG LSLNIMTLSG LALGIGMLVD NSVVVLENIF RHVEQGKQIK EAAITGTEEV
SSPIIASTLT TIAVFLPVFL LEDLAGIIFA DLSYMVVFSL AMSLFTALTV IPVLSVLLIG
HNQAISKFIP IENLKKRYKK SLHYLSKKGK YVLGGAIILM VISFTLLPNL GGEFLPPITR
SEFTVDVRLP PGTHLETTEE VVTEVEQYLL DEEEVDSVYA TIGERASQRE GAGYTQRTPH
RGELMVILET DEQEKLAQQV ESEFYDHDQA SISASEMEGD LEMGGDAIEI DLIGPELDTL
RELSQDIANE VSELEVVSNV SRNLPTPRPE LQVSPKDEQS MLKGITPIQM SQDLETDLTG
RRATIFREDG REIPIVLGYF SEGPESTEEI KEKYQDIATV EKEPGPTVIN RQDGQRYVTI
SADSETRDVR GAVNSIQDRL DNVDIPQGYR LNYGGAYEDM WSSYLELGGA LALSLLLVFM
VMAGQFESLR YPLVIMVSIP FSFVGVILAL YILNDTLNVA SIMGVIILSG LVVNNAIVLV
DCIKREDSVL EGASLRLRPI LMTTITTLLA LIPMAIAVGP GSEIQNSLAF SLIGGLFSAT
LLTLVILPLV IIWIKSRFNL D