Gene Nther_2794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_2794 
Symbol 
ID6314461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp3018834 
End bp3019805 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content39% 
IMG OID642645166 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_001918930 
Protein GI188587385 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4608] ABC-type oligopeptide transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCTGAAG AACCGATTTT AAAGGTGGAA AATCTTAAAA AATACTTTCC CATAAGGGCA 
GGAATACTTT CTAGAGTAGT TAATCATGTA AAGGCGGTAG ATGGGATTAG CTTTAGTATT
TATCCTGGAG AAACCTTTGG TCTAGTAGGA GAGTCAGGTT GTGGAAAATC GACGACGGGT
TTGACGGTTT TAAATTTACA TGAAGCTACT GCAGGAAATA TTGAATACAG AGGCAATGTT
ATTAATGAAA TCGATAAAGA AGAGCTTAGA AAATTAAGGA AGGACATGCA GATAATCTTT
CAGGATCCTT TTAGTTCTCT TAACCCCAAA ATGATGGTTG GAGATGCTAT TGGAGAACCT
CTAGAAGAGC ACGGTATTAC TAAAGGCAAG GAAACCAGAG ATAGAGTGAT TGAGATGTTA
GAAGTATGTG GCCTAGAGGC ATCTCATTAC TACAGATATC CTCACGAATT TTCCGGAGGT
CAGCGACAGA GGATAGGAAT AGCCAGATCC CTGGCTTTAA ACCCAAGTTT TATAGTGGCT
GATGAACCCA TTTCGGCTCT AGACGCTTCT ATTCAGGCTC AGATAATGAC TTTATTGGAA
GAATTACAGG AAGAATTTAA TTTCACCTAT ATTTTTATAG CCCACGATTT GACTGCAGTA
AAATATCTGT GTGATAGAGT AGCAGTTATG TATTTAGGAC ATATTGTGGA ATTAGCACCA
ACTGAAAACT TGTTTAAAGA TCCTCTCCAT CCCTATACTC AAGCTTTGAT ATCAGCAATA
CCAGTTATGG ATCCCCTGGC CAAGAAAGAA AAAATTCTCT TAGAAGGAGA TATCCCAAGT
CCAGTTAATC CACCTTCCGG TTGTCGATTT CATACCAGAT GTCGAATAGC CGAGGATATT
TGTACCAGAG AAATACCCCA GCTAGAGGAA AAGGAAGATG GCCATGAAGT TGCTTGTCAT
CTTGTCAAGT AG
 
Protein sequence
MSEEPILKVE NLKKYFPIRA GILSRVVNHV KAVDGISFSI YPGETFGLVG ESGCGKSTTG 
LTVLNLHEAT AGNIEYRGNV INEIDKEELR KLRKDMQIIF QDPFSSLNPK MMVGDAIGEP
LEEHGITKGK ETRDRVIEML EVCGLEASHY YRYPHEFSGG QRQRIGIARS LALNPSFIVA
DEPISALDAS IQAQIMTLLE ELQEEFNFTY IFIAHDLTAV KYLCDRVAVM YLGHIVELAP
TENLFKDPLH PYTQALISAI PVMDPLAKKE KILLEGDIPS PVNPPSGCRF HTRCRIAEDI
CTREIPQLEE KEDGHEVACH LVK