Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_2727 |
Symbol | |
ID | 6315779 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | - |
Start bp | 2942976 |
End bp | 2944436 |
Gene Length | 1461 bp |
Protein Length | 486 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 642645102 |
Product | beta-lactamase |
Protein accession | YP_001918867 |
Protein GI | 188587322 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 79 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGATTTTG GTGCAAAATT ATCTCAAAGA GAACTTAAGT CTTTGGAAAG TTTTTTAGCT AATGTTCAAA GGGATCATGA TTCCCCGGGA TTAGCAGTAG CTATCACTAA AGGCGATGAA CTGATATACG CTTCTGGATT TGGGTACCGG GATTTAGGTG AAAAAGCTTA CATTGATGAA AATACCATTA TGGGGATTGC CTCTATTACA AAGACGTTTA CTGCTGCGGC AATATTAAAG CTGCAAGAAC AGGGCAAGCT ATCTCTGGAT GATTCAGTTC AAACGTTTCT TCCTCAATTA CAATTCGGTA GGAAAAAAGA TCTAAGAGAT ACAACCATTT TGAACATGTT AACTCATACT ACCGGATTAC CACCTTTAAA AGCATTGATT TACAGTATTA GAGAGAATTC TGAACACGAG GATGAGCTGG TCCAAAAACT TGGCGATAAA ACAGAAAACA ATAATGAAGA AGAACAGGTA CAGCTTAACA GTTATCAAGA TCTGATAGAT TATGTGTCCA GAGAAGGGAT CGATTTGTTA GGTAGCCCTG GAGAATACAC CAGTTATTCT AACGATTGCT ATGCTTTGTT GGGAAAAATT ATTGAAGAAG TTTCCGGGAA AAGTTATCAA GATTATATAT CGGAAAATTT TCTCAAGCCT TTAAATATGA ATCGGAGCAC TTTTTCTCTG GATGAAGTTT TACACAGTGA CAATGTAACT TCTTTATATT ATTACGATGA AAATACGGAA GAGGTCAAAA AAGCCCAGGG ATGGCAGGAA GCACCTCCTT ATCAAGCAGG AGGTTGGCTC AGGTCAACTG CCCGGGACTT AGTGAAGTTT TTTCAGATGT TAGCTCTCGG TGGAAGGCAG GGGCTAAAAC CTGATAATAG GATTTTAACA AAAAGTTCAA TACAAAAACT ACTACATCCT GTGACATATT CACCTTGGGA TCTGGTCAGT ACATATAACC TGGGTTCTTG GATTCAGTCA AATTACTATG GCAGAACCCT GATTCAACAT GGCGGTAGCT TGACGGGAGT CTCTTCTCAT GCCGGCTTTA TTCCGGAAGA AGAATTAGCT GTGGTAGTAC TGAGTAATCT CCGCGGTTTT CCTGTTTATA AAGCTTGGCA TGGGATCGTT AATATATTAC TTGGATTGCA CGTGGACACT TCAAAGGTGA GCTACTACCA GCGGAACTGG CCTAGTGAGC TACTTGTATC CCGGTCAGGT GTCTTTAAAT CAGGTGAAGG TATGGAACTG GAGTTATTTG TTCAACAAAA TACTCTTCAA TGCAGAATGA TTAGAGAAGA TAAAGTATAT CAGATTAAAC CTGTAACTCG ATATGTAGGT ACTATAAATG TTAAAGGCGA TGAAAAAGAA ATCTGGTTTT ATCATAACAG AAAAGACAGT AAACCTTGGG CTATTGGATT TGGCGGCAGA ATGATTAAGA GGGTGGAATA A
|
Protein sequence | MDFGAKLSQR ELKSLESFLA NVQRDHDSPG LAVAITKGDE LIYASGFGYR DLGEKAYIDE NTIMGIASIT KTFTAAAILK LQEQGKLSLD DSVQTFLPQL QFGRKKDLRD TTILNMLTHT TGLPPLKALI YSIRENSEHE DELVQKLGDK TENNNEEEQV QLNSYQDLID YVSREGIDLL GSPGEYTSYS NDCYALLGKI IEEVSGKSYQ DYISENFLKP LNMNRSTFSL DEVLHSDNVT SLYYYDENTE EVKKAQGWQE APPYQAGGWL RSTARDLVKF FQMLALGGRQ GLKPDNRILT KSSIQKLLHP VTYSPWDLVS TYNLGSWIQS NYYGRTLIQH GGSLTGVSSH AGFIPEEELA VVVLSNLRGF PVYKAWHGIV NILLGLHVDT SKVSYYQRNW PSELLVSRSG VFKSGEGMEL ELFVQQNTLQ CRMIREDKVY QIKPVTRYVG TINVKGDEKE IWFYHNRKDS KPWAIGFGGR MIKRVE
|
| |