Gene Nther_2727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_2727 
Symbol 
ID6315779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp2942976 
End bp2944436 
Gene Length1461 bp 
Protein Length486 aa 
Translation table11 
GC content39% 
IMG OID642645102 
Productbeta-lactamase 
Protein accessionYP_001918867 
Protein GI188587322 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones79 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATTTTG GTGCAAAATT ATCTCAAAGA GAACTTAAGT CTTTGGAAAG TTTTTTAGCT 
AATGTTCAAA GGGATCATGA TTCCCCGGGA TTAGCAGTAG CTATCACTAA AGGCGATGAA
CTGATATACG CTTCTGGATT TGGGTACCGG GATTTAGGTG AAAAAGCTTA CATTGATGAA
AATACCATTA TGGGGATTGC CTCTATTACA AAGACGTTTA CTGCTGCGGC AATATTAAAG
CTGCAAGAAC AGGGCAAGCT ATCTCTGGAT GATTCAGTTC AAACGTTTCT TCCTCAATTA
CAATTCGGTA GGAAAAAAGA TCTAAGAGAT ACAACCATTT TGAACATGTT AACTCATACT
ACCGGATTAC CACCTTTAAA AGCATTGATT TACAGTATTA GAGAGAATTC TGAACACGAG
GATGAGCTGG TCCAAAAACT TGGCGATAAA ACAGAAAACA ATAATGAAGA AGAACAGGTA
CAGCTTAACA GTTATCAAGA TCTGATAGAT TATGTGTCCA GAGAAGGGAT CGATTTGTTA
GGTAGCCCTG GAGAATACAC CAGTTATTCT AACGATTGCT ATGCTTTGTT GGGAAAAATT
ATTGAAGAAG TTTCCGGGAA AAGTTATCAA GATTATATAT CGGAAAATTT TCTCAAGCCT
TTAAATATGA ATCGGAGCAC TTTTTCTCTG GATGAAGTTT TACACAGTGA CAATGTAACT
TCTTTATATT ATTACGATGA AAATACGGAA GAGGTCAAAA AAGCCCAGGG ATGGCAGGAA
GCACCTCCTT ATCAAGCAGG AGGTTGGCTC AGGTCAACTG CCCGGGACTT AGTGAAGTTT
TTTCAGATGT TAGCTCTCGG TGGAAGGCAG GGGCTAAAAC CTGATAATAG GATTTTAACA
AAAAGTTCAA TACAAAAACT ACTACATCCT GTGACATATT CACCTTGGGA TCTGGTCAGT
ACATATAACC TGGGTTCTTG GATTCAGTCA AATTACTATG GCAGAACCCT GATTCAACAT
GGCGGTAGCT TGACGGGAGT CTCTTCTCAT GCCGGCTTTA TTCCGGAAGA AGAATTAGCT
GTGGTAGTAC TGAGTAATCT CCGCGGTTTT CCTGTTTATA AAGCTTGGCA TGGGATCGTT
AATATATTAC TTGGATTGCA CGTGGACACT TCAAAGGTGA GCTACTACCA GCGGAACTGG
CCTAGTGAGC TACTTGTATC CCGGTCAGGT GTCTTTAAAT CAGGTGAAGG TATGGAACTG
GAGTTATTTG TTCAACAAAA TACTCTTCAA TGCAGAATGA TTAGAGAAGA TAAAGTATAT
CAGATTAAAC CTGTAACTCG ATATGTAGGT ACTATAAATG TTAAAGGCGA TGAAAAAGAA
ATCTGGTTTT ATCATAACAG AAAAGACAGT AAACCTTGGG CTATTGGATT TGGCGGCAGA
ATGATTAAGA GGGTGGAATA A
 
Protein sequence
MDFGAKLSQR ELKSLESFLA NVQRDHDSPG LAVAITKGDE LIYASGFGYR DLGEKAYIDE 
NTIMGIASIT KTFTAAAILK LQEQGKLSLD DSVQTFLPQL QFGRKKDLRD TTILNMLTHT
TGLPPLKALI YSIRENSEHE DELVQKLGDK TENNNEEEQV QLNSYQDLID YVSREGIDLL
GSPGEYTSYS NDCYALLGKI IEEVSGKSYQ DYISENFLKP LNMNRSTFSL DEVLHSDNVT
SLYYYDENTE EVKKAQGWQE APPYQAGGWL RSTARDLVKF FQMLALGGRQ GLKPDNRILT
KSSIQKLLHP VTYSPWDLVS TYNLGSWIQS NYYGRTLIQH GGSLTGVSSH AGFIPEEELA
VVVLSNLRGF PVYKAWHGIV NILLGLHVDT SKVSYYQRNW PSELLVSRSG VFKSGEGMEL
ELFVQQNTLQ CRMIREDKVY QIKPVTRYVG TINVKGDEKE IWFYHNRKDS KPWAIGFGGR
MIKRVE