Gene Nther_2623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_2623 
Symbol 
ID6315098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp2817345 
End bp2817974 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content34% 
IMG OID642645002 
ProductAccessory gene regulator B 
Protein accessionYP_001918767 
Protein GI188587222 
COG category[K] Transcription
[O] Posttranslational modification, protein turnover, chaperones
[T] Signal transduction mechanisms 
COG ID[COG4512] Membrane protein putatively involved in post-translational modification of the autoinducing quorum-sensing peptide 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAAAAA GATTATCTAA TCTTTTGGCA AACAAAGTGG GTTCTGAACT CAATCGAGAC 
CAAGAAGATA TAGAAGTATA TAGCTATGCC CTTGAAGTGA TAATTGGTGC AGTTATCAAG
GGGGTAGTCT TTTTAACAGT GGGGTTATTA CTGGGAATTT TACCTGAATT TATATTGGTT
ATGGCAGTTT TTGGGATAAT GCGAACAGTG ATAGGGGGCA CCCACTTCCA ATGTTATACA
AAATGCTTGT TCTCAACCCT GGTAATGATA CTTATGATTA TTTGGGTAGC AGATTTTCTC
CCAACTTCAA TCAAAGGAAT AGCTTTTATT TCTGCTCTAT TGTTTTCGAC TTCAATTTAT
TGGATATTAA AATATGCCCC GGCAGTTTGG AATAAAGACA AAAAGGGGTA TCAAGATTAC
AAAAAAACAT ATATCTTTCC TAAAATAGTT TCCATTGCCT GGATAATGAT CACAGGTGGA
TTGTTTTACT ATGTAAGTCC ATTACATGGA TATTTGTCCC TTTTAAGCGG TACTTTTGCC
AGCCTTTTAA TAACTTCAAC TAGCTTTAAG ATAATAAGTC ATTTGGATAT GAGATTATTA
GTAAATAATC AAGAAAGAAA GGAGGCATAA
 
Protein sequence
MIKRLSNLLA NKVGSELNRD QEDIEVYSYA LEVIIGAVIK GVVFLTVGLL LGILPEFILV 
MAVFGIMRTV IGGTHFQCYT KCLFSTLVMI LMIIWVADFL PTSIKGIAFI SALLFSTSIY
WILKYAPAVW NKDKKGYQDY KKTYIFPKIV SIAWIMITGG LFYYVSPLHG YLSLLSGTFA
SLLITSTSFK IISHLDMRLL VNNQERKEA