Gene Nther_2616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_2616 
Symbol 
ID6317085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp2810027 
End bp2811130 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content38% 
IMG OID642644995 
Producttransport system permease protein 
Protein accessionYP_001918760 
Protein GI188587215 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones77 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAGAA ATATTCAGCA ACAAGAGATC CAAAACCCTG AACAGGCCTA CATATCTTCA 
ACAAACAAAA AGATCTTGGT AATTTTGTGT TTAATCACTG TTTTATTTAT TGTATCTCTA
TTAGCCCTTT CATACGGAGC TTCTTCCGTT GGCCCGGTAG ATGCTTTTAA TATTTTAACT
TCACCAATCA GAAGTACAGA TGCAGTAGCT GAAGTTTCAA ATACAGAAAA AATCATAGTA
TTACAGCTGC GTTTACCTCG GGTCCTTTTG GCAGTGATGG CGGGATTTTC TTTGGCAGGA
GCAGGCGTAG TGATGCAGGG GATTTTAAGA AATCCACTGG TAAGTCCTTA TACCTTGGGG
CTTTCCAGTG GAGCTGCTTT TGGCGCTGCC TTAGCCATAG TACTGCAGGT TGGAATTTTT
GGAAGCGGGT TATCCAGTTA TCATGAATTA TTTATACCTG CTAATGCCTT TGTCTTCGCT
ATGTTGACCA TGTTTTTTAT TTATATCATT TCTAGTATGA AAGGGGCTAC TTCCGAAACC
TTGATTTTGG CAGGTGTAGC CATAGGTTAT TTCTTTTCAG CCCTGGTTTC AGCTTTAAAA
TATATCAGTG ATTCCGATGA ATTACCGGAA CTGGTTTACT GGTTAATGGG AAGTATTATT
GGAGCTAACT GGACTAATAT TATAATTATC TTTATCCCAA TGGTGATTTC AATAGTGATT
TTATTACGTT ATTCCTGGGA TTTAAATGTT TTAGGTGGAG GAGAAGAAGT AGCCAAAAGT
TTAGGTGTTG ATGTCAAAAG GATGAAGATA ATTTGTCTGA TATTTTCATC TTTGATTGCT
GCTGTAGCTG TAGCTTTTAC CGGTATTATT GGTTTTGTGG GTCTGGTAGG TCCTCACATC
AGCAGGATAA TAGTAGGAGC TGATTATCGA TTTTTACTGC CAACTTCTTG TTTCATGGGA
GCTTTGTTAC TTTTATCAGC CGATACCCTG GCGAGAACTA TGATTGCTCC GTCAGAAATA
CCTGTGGGAA TAGTTACTTC ATTACTTGGG GTTCCCTTCT TTTTATATCT ACTATTAAAA
AAGAGAAAGG TTTGGTGGCA GTGA
 
Protein sequence
MSRNIQQQEI QNPEQAYISS TNKKILVILC LITVLFIVSL LALSYGASSV GPVDAFNILT 
SPIRSTDAVA EVSNTEKIIV LQLRLPRVLL AVMAGFSLAG AGVVMQGILR NPLVSPYTLG
LSSGAAFGAA LAIVLQVGIF GSGLSSYHEL FIPANAFVFA MLTMFFIYII SSMKGATSET
LILAGVAIGY FFSALVSALK YISDSDELPE LVYWLMGSII GANWTNIIII FIPMVISIVI
LLRYSWDLNV LGGGEEVAKS LGVDVKRMKI ICLIFSSLIA AVAVAFTGII GFVGLVGPHI
SRIIVGADYR FLLPTSCFMG ALLLLSADTL ARTMIAPSEI PVGIVTSLLG VPFFLYLLLK
KRKVWWQ