Gene Nther_2600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_2600 
Symbol 
ID6314950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp2793258 
End bp2795015 
Gene Length1758 bp 
Protein Length585 aa 
Translation table11 
GC content37% 
IMG OID642644979 
ProductPAS modulated sigma54 specific transcriptional regulator, Fis family 
Protein accessionYP_001918744 
Protein GI188587199 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTTGATA GCTTAATGAA TGCTATAAAT GATGCTCTAA TAGTTACCGA TGAGCACAAC 
AAAATAGAGT GTTTTAATTA TAAAGCAGAA GAAACTTTTA ACATTAGTCA CAATCACTTA
GGGGAAAAAA TTGAAGGGAT TATTTTTATA CCCGATGACT TAAAGAAGAG TGATACTATA
ACCGAAGGTA AAAAGGAATC ACAAAGAAGG ATAAATTATT ACGGGAAAAC ATTATCCGTT
ATAAAAACAC CTATTATTGA ACCTACTATT GAAAATCAAT GCCATCTCGG TAATTACTAT
ATATTTGAAG ATATATCGGA CTCCGTCAAA CTTAAAAGAG AACTTTCTAA TGCCAGATCA
TCTGCTAATG CCATGGAAAA TGTGCTGGAA AAAGCCTATG ATGGCATAGT TATGATAGAT
CACAATGGAA TAATTACTAA GTTCAATAGT GCTTATCAAC AGTTTACCGG GATTTCGGAA
CAAGAAGCAC TGGGAAAACA TGTGACAGAA GTTATTGAAA ATACCAGAAT GCATAAAGTT
CTGGAGACGG GGAAGCCGGA AATAGGAGAA ATTCAAAAAA TCAAAGGCTG CGAAATGGTG
GCTACCAGAG TCCCCATTTA TGAAGAAGGG GAGATAGTTG GGGTTTTAGG AAAAGTGTTG
TTTAGAGATA TCAAAGAAGT AAAAGCCCTG GCTGAAAGGT TAGACGCTGC TACTAACGAA
CTCGATTATT ATAAAGGTGA AGTCAGAAAG CTCAAGGGTA GTAAATATAA TTTTGAGAAT
ATAGTGGGTT CAAGTAAAAA AATCATAGAA GCCAAAGAAA TGGCTAAAAT AGCTTCTCAA
AGTGATTCCA CCGTCCTTAT CCGAGGTGAA AGCGGTACCG GGAAGGAATT ATTCGCCCAT
GCCATTCACG ATGGGAGCTT AAGAAGATAC GGGGCCTTTA TCAGGGTTAA CTGTGCAGCT
ATTCCAGAAA ATCTATTGGA AGCGGAACTC TTTGGTTATG AAAAAGGTGC CTTTACGGGT
GCTAACAAAG AAGGGAAACC TGGAAAATTT GAACTTGCCA ATGGAGGAAC CATATTTTTA
GACGAAATCG GCGATATGCC CTTTGATATG CAGGTGAAAC TACTGCGAGC CCTACAAGAA
CGGGAAGTGC AAAGAATAGG AAGTGAGCGG GTAATTGATT TAGATGTCAG AATTATAGCC
TCTACGAACA GAAATTTAGA ACAGTTGATT GCTCAGGACA AATTTCGAGA AGACCTTTAT
TATCGCTTGA ATGTATTTAA TATTAATGTT CCGCCATTGA GGGAGATGAA AGATGATTTA
GAAAAGCTGA TCAATTTTAT AATCAAAGAC TTGAATGACG AAATGGGTCT AAATGTCAAT
GGCGTTTCTT CGGAAGCAAA TAAAATATTA AATTCCTATC ACTGGCCCGG CAATATCCGG
GAACTGAAAA ATGTGTTGGA AAGGTCAATG AATGTGGCAA AAGGCAATAT TATTACAAAA
GACTGCATTC CCCAGTATTT ATTAACATGG GCTGGGGCAG AAGAACAGCA AAATAACAGT
AATAGTAAAT CCCATGAAAT AAATTTGCAT AATTTAGAGC TCAGATCAGT AGTCAAAGAA
GCCGAAAAAC TGGCCATTGA AACCGCCCTA AAACAGACTA ATAATAACAA GAAAAAAGCA
GCCGAACTCT TAAATATTCA CAGATCGGGC TTATACAAAA AACTCGAAGA ATATAATATT
TCAGACCAAA CTACTTGA
 
Protein sequence
MFDSLMNAIN DALIVTDEHN KIECFNYKAE ETFNISHNHL GEKIEGIIFI PDDLKKSDTI 
TEGKKESQRR INYYGKTLSV IKTPIIEPTI ENQCHLGNYY IFEDISDSVK LKRELSNARS
SANAMENVLE KAYDGIVMID HNGIITKFNS AYQQFTGISE QEALGKHVTE VIENTRMHKV
LETGKPEIGE IQKIKGCEMV ATRVPIYEEG EIVGVLGKVL FRDIKEVKAL AERLDAATNE
LDYYKGEVRK LKGSKYNFEN IVGSSKKIIE AKEMAKIASQ SDSTVLIRGE SGTGKELFAH
AIHDGSLRRY GAFIRVNCAA IPENLLEAEL FGYEKGAFTG ANKEGKPGKF ELANGGTIFL
DEIGDMPFDM QVKLLRALQE REVQRIGSER VIDLDVRIIA STNRNLEQLI AQDKFREDLY
YRLNVFNINV PPLREMKDDL EKLINFIIKD LNDEMGLNVN GVSSEANKIL NSYHWPGNIR
ELKNVLERSM NVAKGNIITK DCIPQYLLTW AGAEEQQNNS NSKSHEINLH NLELRSVVKE
AEKLAIETAL KQTNNNKKKA AELLNIHRSG LYKKLEEYNI SDQTT