Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_2544 |
Symbol | |
ID | 6316357 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | - |
Start bp | 2738184 |
End bp | 2738891 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642644926 |
Product | N-acetylmuramoyl-L-alanine amidase family 2 |
Protein accession | YP_001918691 |
Protein GI | 188587146 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG5632] N-acetylmuramoyl-L-alanine amidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0000466767 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCAGATCA ATCAGAAACT TATAGACTAC AACTACTCCA GTAGACAGAA TCAAACCATT TCGTACCTGG TGATCCACGA TACCGGAAAC TCCCGGCCGG GCGCCGATGC CAAAGCCCAT TACCACTACT TCAATGCCGG TAACAGAAGT GCCTCGGCCC ATTATTTTGT GGACGATACC CAGATCTTGC AGCTGGTAGA AGATCATCAC GCCTCCTGGC ACTGCGGTGA CGGCAGGGGG CGGTACGGAA TTACCAATAG TAATTCCATA GGGATAGAGA TATGCATCAA CTCCGATGGG AACTATGCCA AAGCAGTAGA ACAGACCATA AAACTGACTG CATACCTGGC AGAAAAGTAC ACCATCCCCC ATAACAAGAT AGTAAGACAC TACGATGTCA GCAGAAAGAT CTGTCCTGGG ACTATGAGCC GGGACAACTG GGCCCTGTGG TATGAGCTTA AAGATGATGT ATTAGCACTC AGAAAGCAGA ATTCACACAG TGAGGATGCA TCTGGAAAGC TAAACTCCCA AAGTGAAGTT GAACCCGAAA CCAATAATCT TAAGAGATCT ATCCAGATCC TAACTGAAGC GGGTATCATC AATTCACCTG AGTACTGGGA CCAACATGCC CGAAAGGGTG AGACAATTAA AGGGCAGTAT GCGGCTTTCT TGATTGAGAG GGTGGCACAA AAGTTAAAAA CAAAATAG
|
Protein sequence | MQINQKLIDY NYSSRQNQTI SYLVIHDTGN SRPGADAKAH YHYFNAGNRS ASAHYFVDDT QILQLVEDHH ASWHCGDGRG RYGITNSNSI GIEICINSDG NYAKAVEQTI KLTAYLAEKY TIPHNKIVRH YDVSRKICPG TMSRDNWALW YELKDDVLAL RKQNSHSEDA SGKLNSQSEV EPETNNLKRS IQILTEAGII NSPEYWDQHA RKGETIKGQY AAFLIERVAQ KLKTK
|
| |