Gene Nther_2531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_2531 
Symbol 
ID6315454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp2725192 
End bp2726352 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content28% 
IMG OID642644914 
Productglycosyl transferase group 1 
Protein accessionYP_001918679 
Protein GI188587134 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.000269278 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCATTTC AAGAACAAAA ACCGCATGTT TTATATATAT TACCGGTACC AAGATTCTTT 
TCTTATTACA ATGGTATAGG TGGACACATA ACGCATGCTT ACGGAATAAT TAAAAGCTTA
TCTAAGTACT ATAATGTCCA TGTTTTGGTT GAAGAACTTC CTCCAGATTA TTTTAAAGGG
GAGAATATAT TCTTCCATAT TTGCCCAAAT AAAAAAAGTA ATAGTAGAAA CATACTTGCT
AGACAGGTGT GGTTCCCAAA ACTTATTAAA AAAATAAAAA ATATAATTAG TAAACACAAA
ATACAATTTT GTTATATGAG ATATTCAGTA GGTTTTTCCC CTTGGATTGG AAAATGCAAA
AAAACTTTAA ACGATATACC TTTGGTAATA GAATTAAATA GCTTTGCTAG TCAAAAAAAT
AAACTTTTTA GTTTTATAGA AAGTAGAGCC TTTAAATATT CTGACTTAAT TTTGCCTGTA
TCTGAACTTG TCAATAATGA TCTATACAAT ATTAATCCCA TTTTGTCTAA AAAAACAATA
ATACTTCCTA ATGGAGTTAG TATAGATAAA TTTGATAATA TTTCAAATAG AAGTGATTTA
AATGAAAAAT GTGAGATAAA TATTGGTTTT GCTGGTCAAC TTAAGTCAAA TTACGGGTTG
GAATATTTAA TAGAAGCTTT TAAAATAGCT AAAAGAAAAG ATAATAGGTT GAAGCTCCAT
TTCTATGGAG ATGGTTCTTA TAAAAAAGAG CTTCAAGAAA TGGCCCAACA AGTTAACGAT
ATTATTTTTC ATGGAGTTGT GCCTTATGAA AAAATGGAAG AGGTATATAG TTTCTTAGAT
ATATTGATCT ATACTACTGA TTATTGGCAT AAATTCCAAT CTCCTATTAA GCTTTACGAA
TACTTAGCTA CTGGAAAACC CGTGATAGCT GCACAAACCC CTCATACAAA TAAATTGATT
GATAATGAAA AAAATGGTTA CTTATTTGAT ATAGGAGATT ATGAAATGCT TGCGGATAAA
ATTTTAAAGG TATTAAGTGA ACCACAAGAG GCAATGAAAA AAGCTTCTAA AGCAAAAAAA
GAAATAAAAG AAAATCATTC CTGGGAAAGT AGAGTTGAAA CTTTATTAAA TGAGTTAAAA
GAAAGGAGAC TGATCGAATA A
 
Protein sequence
MSFQEQKPHV LYILPVPRFF SYYNGIGGHI THAYGIIKSL SKYYNVHVLV EELPPDYFKG 
ENIFFHICPN KKSNSRNILA RQVWFPKLIK KIKNIISKHK IQFCYMRYSV GFSPWIGKCK
KTLNDIPLVI ELNSFASQKN KLFSFIESRA FKYSDLILPV SELVNNDLYN INPILSKKTI
ILPNGVSIDK FDNISNRSDL NEKCEINIGF AGQLKSNYGL EYLIEAFKIA KRKDNRLKLH
FYGDGSYKKE LQEMAQQVND IIFHGVVPYE KMEEVYSFLD ILIYTTDYWH KFQSPIKLYE
YLATGKPVIA AQTPHTNKLI DNEKNGYLFD IGDYEMLADK ILKVLSEPQE AMKKASKAKK
EIKENHSWES RVETLLNELK ERRLIE