Gene Nther_2528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_2528 
Symbol 
ID6315451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp2721584 
End bp2722828 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content29% 
IMG OID642644911 
Productglycosyl transferase group 1 
Protein accessionYP_001918676 
Protein GI188587131 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0000156841 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGACAAGTT CTAATAACAA ACATATACTC ATTTTAAATC ATCATGCAAG TTCACCGAAT 
GTCGGTGGAG GTGCTAGACA TTACGAATTA GGGGAATTTT TATCTTCAAA GAAATATTAT
GTTTCAATAG TTTCATCTTC CTATAGTAAA TCAAAAAATC GATATCATTA TGATGAAGAG
ATTAAGATAG AAACTTATAA TCAATATTTT AATTTTATAT ATTTGAAAAC AAAACCTCCA
TTTGGGAGCA CTTTAAATAG ATTTAGAAAT TACTTAGATT ATATGAACAA AGCTTATAAG
TATCGTGAGT ATTATAAAAA TCCTGATGTT GTTATTGCAT CTTCTGTTCA TCCTCTTGCT
TGGAGTGCAG GGTATAAAAT AAGTAGAAAA TATAATGCCA AGTTTGTTGT GGAAGTTAGA
GATTTATGGC CTCTCAGTAT GTACGAAGAC TTTTCAGGTA TAACTCGAAA AGGTGTTTTT
TCTTTCTTTG AGTACTTTGA GCGTAAATAT TATAATTTAG CAGATAAAAT TATCACAACT
GCTCCTTACG CTTATGAGTA CATTGAAGAA AAATATGCAA TTAACAGAGA TAAAGTAGTT
AATATTCCTC ATGGGATTGA TATTAAGAAT TTTGATAGAA ACCTTCAAAA AAGCGAACAT
AATTTACCGC AGGATTTAAA GAAAATTTTA GATAATTATT TTTGTATTAC ATATACAGGG
TCTCTATCTC AAAGTGAAGG TTTGGAAACA TTAGTTGAGG CAGCCAAACA TTTACAAAAA
TATGAGGAAA TTAAGATAGT TATTGTAGGT GGCGGAAGTG AAAAAGAAAA ATTGAAGAAT
GAAATTCAAC AAAATAAGTT AAATAATGTA ACAATGTTCG ATAAAGTGGA TAGAGATTTA
GTCCCCTTAA TTTTAAAGAA ATCTAAGGTT TTATTTTGCG GCTTGAAAGA TAGAAAAGTT
TTTAAATATG GAATAAGTAA AAATAAATTT TATGATTATA TGGCAGCTAG TAAACCTATA
ATATTTGCTT CAAATGTGAG AGGAAGTATT ATTTCAAAAG CTGAAGCAGG TATTACTATA
CCACCGGGCG ATCCCAAAAA CTTAGCTGAT AATATAGTAA ACTTGTATAA AAATATTAAT
ACTTTAGGTG TTAAATATGG TGAGAATGGT AGACATTATG TTGAGAAAAA TCATACGGTT
AATACAATAT CAGGACAATT TTTAGAAGTG ATTGAAGAAA GTTAA
 
Protein sequence
MTSSNNKHIL ILNHHASSPN VGGGARHYEL GEFLSSKKYY VSIVSSSYSK SKNRYHYDEE 
IKIETYNQYF NFIYLKTKPP FGSTLNRFRN YLDYMNKAYK YREYYKNPDV VIASSVHPLA
WSAGYKISRK YNAKFVVEVR DLWPLSMYED FSGITRKGVF SFFEYFERKY YNLADKIITT
APYAYEYIEE KYAINRDKVV NIPHGIDIKN FDRNLQKSEH NLPQDLKKIL DNYFCITYTG
SLSQSEGLET LVEAAKHLQK YEEIKIVIVG GGSEKEKLKN EIQQNKLNNV TMFDKVDRDL
VPLILKKSKV LFCGLKDRKV FKYGISKNKF YDYMAASKPI IFASNVRGSI ISKAEAGITI
PPGDPKNLAD NIVNLYKNIN TLGVKYGENG RHYVEKNHTV NTISGQFLEV IEES