Gene Nther_2403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_2403 
Symbol 
ID6317019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp2567960 
End bp2568874 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content45% 
IMG OID642644791 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001918556 
Protein GI188587011 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000292743 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAAT CAGAAACCCA AAAAAATACC TCTGTCACGG AAAGTACAGA TCAACAGAAA 
ACTGAACAGG TTGGTCGTAG TCAATGGGCT GAGGCCTGGC GACGCCTGAA GAGGAATAAA
TCGGCCATGG TAGGATTGTT TCTCGTGGCC CTACTCTTTG TAACGGCTAT TTTTGCCGAT
GTAATTGCTC CTTATGATTA CGCTGAACAA AATTACGATG CAGTGAGGGA ATCGCCTTCT
TCTGAATTTC TACTAGGTAC TGACCACTTG GGTAGATGTA TCTTGAGTAG AATTATTCAC
GGTACTCGCC TGTCTATTCA GGTTGGTTTC ATAGCTATAG CTATTTCTCT AGTATCGGGA
AGTCTTTTAG GTGCTATAGC GGGTTATTTT GGCCATTTGG TGGACAATGT TGTCATGAGA
GTTGTGGATA TAATTTTATC TATTCCACCT ATTTTGTTGG CCATTGCCAT TGTTAGTGCC
ATTGGCCCCT CGCTGACTAA TTTATTTATT GCAGTAGGAA TAGGGTTTAT ACCCCAATTT
GCCCGGATCG TCCGGGGTTC TGTACTAACC TTGAAAGAGG AAGAATTCGT AGAAGCTGCC
CAGGCCCTGG GAGCTAAAAA TAGCAGGATA ATAGTTAAGC ATATCATCCC CAATGCTCTA
GCTCCTATCA TTGTACAGGC TACCCTGGGT GTAGCTATGG CTATATTATC AGCTGCAGGA
CTGTCCTTCA TCGGTCTGGG TGCACAGCCG CCGGCTCCTG AATGGGGAGC AATGCTTTCC
GATGGTATGA GATTTATCAG GGATTCCTGG TGGATTTCTA CATTCCCGGG ACTAGCCATT
GCCCTAACTA TACTGGGGCT AAACCTATTT GGAGACGGCT TGAGAGATGC CTTGGACCCA
AGGTTGAAGG ACTAA
 
Protein sequence
MAESETQKNT SVTESTDQQK TEQVGRSQWA EAWRRLKRNK SAMVGLFLVA LLFVTAIFAD 
VIAPYDYAEQ NYDAVRESPS SEFLLGTDHL GRCILSRIIH GTRLSIQVGF IAIAISLVSG
SLLGAIAGYF GHLVDNVVMR VVDIILSIPP ILLAIAIVSA IGPSLTNLFI AVGIGFIPQF
ARIVRGSVLT LKEEEFVEAA QALGAKNSRI IVKHIIPNAL APIIVQATLG VAMAILSAAG
LSFIGLGAQP PAPEWGAMLS DGMRFIRDSW WISTFPGLAI ALTILGLNLF GDGLRDALDP
RLKD