Gene Nther_2400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_2400 
Symbol 
ID6317016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp2564309 
End bp2565628 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content40% 
IMG OID642644788 
Productsodium:dicarboxylate symporter 
Protein accessionYP_001918553 
Protein GI188587008 
COG category[C] Energy production and conversion 
COG ID[COG1301] Na+/H+-dicarboxylate symporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000628072 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAG GTAAAGGAAT CTTACGCAAG TATTTTGAAA TCCCCTTCAT CCAGAGAATG 
GGGGTAGCCT TTGTACTTGG TATTATCGTA GGCCTAATAG TTGGAGAACC CATAAAAGTA
ATTGAACCTC TAGGAGATCT ATTTCTCAGA TTATTGATGA TGGTTGTTAT TCCAATTATT
GTTTTTACTT TAATTACAGC AATGAAGAAA TTGACACCAT CGCAATTGGG GCGAGTGGGT
GGTCAAACTG TCGGAATTTA TATTTTAACT ACTATTGTAG CAATTATTAT CGGTTTAACA
ATGGCTAATT TGTTCAACCC TGGACTAGGT TTAGAGTTGC CCGGTGAGTA CGATATGGAT
CCAGAAGAAG CACCGAGTAT GATTGATGTA TTTCTGAATT TATTCCCAGA AAACGTGGTT
GAGGCTATGG CCGAGGCCGA AGTTCTTCAG GTATTGATAT TTGCAATTAT CTTCGGTATA
GCTTTGGCTT TTGTCAGGGA ATCCAGTGAT AATGAAGAAG TAAAAAATGG TGTAGACATA
ATTTTTAACA TTACAGAAAC AGCTTCTGAA GCCATGTTCA AAATTGTCAG GGGTGTAATG
GAATACGGTG TTATTGGTGT ATTTGCATTA TTAGCAGTTA CTTTTGGGGA AGCTGGCCCC
GAAGCCCTGG TGGAATTTGG CCTGGTAATA TTAACTTTCG TGTTGGCTGT GGGAATCCAC
ATGTTGATAA TTTATGGTGT TATTTTAAAT GGAGTTATAT TGAGAAAATC GCCTTTGAGA
TTTATTAAAG GTACTAAAGA AATACTGTTA ACAGCTTTTG CAACCAGGTC CAGTGCTGGT
GTACTACCTA TTTCCATGCG AACTGCCAAT GAAAACTTGA AAATCGATGA GAAAATATAT
TCATTTACTC TTCCTTTAGG AGCCACAATT AATATGGATG GAACTGCCAT GTATCAGGGT
GTTGCCGCTA TTTTTGCAGC TAACCTGGTT GGGGAATCAC TGACTCTGGT GGAACAGATT
ACTATTGTTA CTACTACGGT ACTGGCCAGT ATTGGTACAG CAGGAGTACC TGGTTCAGGT
ATGATAATGT TGTCTATGGT ATTGACTCAG TTGGGCTTAC CCCTGGGAGT AGTCGCCTTT
GTAGCGGGTG TTGATCCAAT ATTAGATGCT TTCAGAACCA TGAACAATGT CGCCGGTGAC
TTGTCAGTAA CCAGTGTTGT TGCTAAGTAC AATGATGGTA TTGACCTGAA TTCAGGAGCG
TGGGTTGACT TTCAAGATGA AGGTGAAAGT ACAGACTCTG GAACAAGTTC TGATAGTTAA
 
Protein sequence
MAEGKGILRK YFEIPFIQRM GVAFVLGIIV GLIVGEPIKV IEPLGDLFLR LLMMVVIPII 
VFTLITAMKK LTPSQLGRVG GQTVGIYILT TIVAIIIGLT MANLFNPGLG LELPGEYDMD
PEEAPSMIDV FLNLFPENVV EAMAEAEVLQ VLIFAIIFGI ALAFVRESSD NEEVKNGVDI
IFNITETASE AMFKIVRGVM EYGVIGVFAL LAVTFGEAGP EALVEFGLVI LTFVLAVGIH
MLIIYGVILN GVILRKSPLR FIKGTKEILL TAFATRSSAG VLPISMRTAN ENLKIDEKIY
SFTLPLGATI NMDGTAMYQG VAAIFAANLV GESLTLVEQI TIVTTTVLAS IGTAGVPGSG
MIMLSMVLTQ LGLPLGVVAF VAGVDPILDA FRTMNNVAGD LSVTSVVAKY NDGIDLNSGA
WVDFQDEGES TDSGTSSDS