Gene Nther_2389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_2389 
Symbol 
ID6314276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp2553182 
End bp2554171 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content43% 
IMG OID642644777 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001918542 
Protein GI188586997 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones82 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGAAAA ATTTGGGCTT TAGGCGATTT GTCTTGCGTA GAATCGGTCA AGTAATCATC 
AGCTTATTCA TTGTTGCCAC CATTGTATTT TTTCTCTTTC GATTATTACC CGGTGACCCG
ACAGCAGCCA TGATGCAGCC CGAAATGTCC TCAGAAGCCC AAGAAATGAT TCGGGAAAGA
TTTGGTCTTG ACCGCCCTCT TCATGAACAG TATTTAGCAT ATATGGTTAA CTTGCTTCAA
GGGGACTTTG GTATATCCTT TCACTACAGA CTACCCGTTA GCCAAGTTAT AGGTACTTAC
ATTCTGAACA CCCTTTGGCT AATGTTTTCA GCTATTGCAG TTGCCTACAT TGGAGGAGTC
CTAATAGGTG GGTTAATGTC CTGGTATCGC GGATCAAGAC TAGAAACTTT CTTGAGTGGT
GGTGTACTAT TCTGTCGGTC TTTACCACCT TTTTTCTTGG GAATGGTGGG AATAATGGTT
TTTAGCTTTT ATTTTGAATT ACTCCCCCAT TCTGGTATGA GGTCCCCTGG AGCTAATCCA
GTGGGTTTTG TAGAAACTTA TTTAAATTTA GACTTCCTCT ATCATTTGAT TCTGCCAGTA
GCCATGTCGA GTTTATATTA TCTAGCTCGT CCCACTCTGA TTATGAGAAA TAATATGCTG
GAATTGAGAG GAGCCGATTT TGTTGAACTA GCAAGAGCCA AGGGGCTCAG ACAATCTCGG
GTAATCTACC TTCATGCAGC CAGGAATGCA ATTTTACCTG TAATAACTAA TTTAGCTCTC
TTCCTGGGAA TGGCCATTGG AGCAGCAGTA GCCGTTGAAT ACGTTTTTGG ATGGCCAGGC
CTCGGCCGTG AAATGGTCAG GGCTGCACAA CTCAGGGATT ATCCCCTAGC CCAGGCTTGT
TTTCTAATGT TAGCAGCTAA AGTAATGGTA CTGAATCTGT TAGTAGATAT ACTCTATGGC
TATCTAGATC CCAGGATCAC CTATGAATAA
 
Protein sequence
MVKNLGFRRF VLRRIGQVII SLFIVATIVF FLFRLLPGDP TAAMMQPEMS SEAQEMIRER 
FGLDRPLHEQ YLAYMVNLLQ GDFGISFHYR LPVSQVIGTY ILNTLWLMFS AIAVAYIGGV
LIGGLMSWYR GSRLETFLSG GVLFCRSLPP FFLGMVGIMV FSFYFELLPH SGMRSPGANP
VGFVETYLNL DFLYHLILPV AMSSLYYLAR PTLIMRNNML ELRGADFVEL ARAKGLRQSR
VIYLHAARNA ILPVITNLAL FLGMAIGAAV AVEYVFGWPG LGREMVRAAQ LRDYPLAQAC
FLMLAAKVMV LNLLVDILYG YLDPRITYE