Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_2318 |
Symbol | |
ID | 6315795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | - |
Start bp | 2466590 |
End bp | 2467291 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 642644705 |
Product | Flp pilus assembly protein CpaB |
Protein accession | YP_001918471 |
Protein GI | 188586926 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3745] Flp pilus assembly protein CpaB |
TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 92 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGAAAAAAC TCAAAAAATA CCGTGGACTA TTAGTATCAC TTATTTTGGC AATTGTTACT GTACTGATTA TCCATCAGTA CATTTCTTCT CTAGAAACAG CTTATGAAGG TACTGGACCT AGAGAGATAG ATGGCGAAGA TCAAGTAGCT GTTGTAGTGG CTACAAGCAA TTTAGACACA GGGACAATTC TGACTCAGGA TCATTTAGAT ACCAGAAAAG TTCCAGAGCA AACTGCTCAT CCTCAAGCTG TAACGGATAA AGAAGAAATA ACTGGAGAAG TATTGAAACA AGATGTGGTT GAGCACGAAG TTCTAATGTC TAGTAGGGTT CTTGGTGAAG AAGAAGCTAA TAAATTATCA GAAGTAATAC CTGAAAACAA GAGGGCTATG TCAGTTGCCG TGGATCAAGT TTCTGGTGTT GCCGGTTTTA TTCAGGCTGG AGATTATGTG GATGTAGTAG CAACAAAGGA TGAAGAAGAT AGAGAAGGAC AAGAGCCTTC CCAAGATAGT AGTTCAGAAA TTATCCTAGA TAACTTACAA GTCTTAGCTG TTGGTGATAG AATCCTGTAT TCAAGACAAG AATTGGTCCA AGAAGTTTCA ACTGTAACCC TGGCCGTTAA TCGTAATGAA GCTACTGAAC TTACCCATGC TGAAGAAGAA CATGTGATCA GGTTGCTATT ACAGCCTATT ACCGAGAATT AA
|
Protein sequence | MKKLKKYRGL LVSLILAIVT VLIIHQYISS LETAYEGTGP REIDGEDQVA VVVATSNLDT GTILTQDHLD TRKVPEQTAH PQAVTDKEEI TGEVLKQDVV EHEVLMSSRV LGEEEANKLS EVIPENKRAM SVAVDQVSGV AGFIQAGDYV DVVATKDEED REGQEPSQDS SSEIILDNLQ VLAVGDRILY SRQELVQEVS TVTLAVNRNE ATELTHAEEE HVIRLLLQPI TEN
|
| |