Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_2316 |
Symbol | |
ID | 6315793 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | - |
Start bp | 2463322 |
End bp | 2465355 |
Gene Length | 2034 bp |
Protein Length | 677 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 642644703 |
Product | type II secretion system protein E |
Protein accession | YP_001918469 |
Protein GI | 188586924 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 93 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAACA AGCTAGAAAA ATTAAGACAA AGACAAGCAG CTTTACTGAA ACAGGCTAGA GAAATTTGGG ATAAGCAATT TACTGAAAAT AGAGAGTTAA CTGAACAGGA ATATAAACAG TACCAAAAAT TGATGAAAGA TATTAGCAAA TTAAAGGATA AAATAAACGA AGAGCTGCGA CTAAAAGAGT TGGAAGAAAA TTTAAATTCT TCTGAACAAG CGAACTTAAA TGCAGAGGGT AAACAGGAAG TGAACTTGGA ATCAGAAGGT GAACAGCCAG TTAGTTCGGA GCCAGCTAGT TCGGAGACAG AAAGTGAACA GCAATTAAAC TCGGAGACAA AAAGTGAACA TGATAATAGT GAACAAGCCG AAGGTCAGGA AACTACCGAC AAGGTTGAAA ATGAAGATGA AACTAAAACT GAAACTGTTA ACAATCAAAG TCAAACTGAT GATAGCAATA CTCATGATAG TGCTTATGAT AATGATCAAG ACCCGAAACA GAAATGGATA GTAGGAATGG AAGAGAAAAA CCAAAGTCAG CATGAATCGA GGAACCAAAA AGCTGATGTT CAATTAGGAG AAGTGTTACC ACCAGAAAAT ACTGAAACTG AAAATAATGA AAATGGTCGA GGAAAAGCCT CATTACTATC AAGGCTGAAT AAACGCAAGC AAGAAGCTGC CCTCATGGAA TCAGCCAAGG GTTCTAATAA AAGCAATCAA CCGAATAATC AAACAACTTC TCAACCTAAA TCTGGAAAGA ATGGTAGGGC TAAAGCTAAC GGGCAAGTTG AAGATAAGGA CGATTTTAGA GAACTAAAAA GTAGACTCCA TAGGGCTTTA ATTGATGAAA TTGACAAGGA TATATTGCAA GAATCTAACT CAGAGGATGA AGAATTAGAA CTAAAATCAG AAATCGAAGA AACGGTGGAA AATCTATTAG ATCAAGAAGA AAAACCTTTA TCTTCAACTG ATCGTGACAA AATCAAAGCG GAAATCCTAA ACGAAACTTT GGGATTCGGA CCTATTACTC CTCTAATTGA AGATGAAAAT GTTAGTGAAA TAATGGTAAA TGGACATGAT CAGGTTTATG TCGAGGAAAA TGGCAAATTA AAGTTAACCG ATATTAAATT TCGAGATGAA CAGCATGTTA TTCATGTGAT TGAAAAAATT GTCGCTCCAC TGGGACGAAG AATAGATGAA AGTTCTCCCA TGGTTGATGC CAGGCTACCT GACGGATCTA GGGTAAACGC CATTATCCCA CCATTATCTT TGACAGGTCC GGTAATTACT ATCAGAAAAT TTTCCGAAGA TCCCTTAACA GCCAAGGATT TAATTAGTTT TGGAACTATG ACTACTGAAA TCTCAGACTT TTTGAAGAAA TGTGTTAAGA ATAGATTGAA TGTGGTAGTC AGTGGTGGTA CAGGAAGTGG AAAGACAACA ACTTTAAACG TACTGTCATC TTTTATCCCA CAAGATGAGC GGATTGTAAC TATTGAGGAT GCTGCCGAAT TAACGCTACA CCAGGATCAT GTGGTAACTT TAGAAACCAA GCCACCTAAT ATGGAAGGTA AGGGAGCCAT TACAATGAGA GAACTGGTGC GTAATTCCCT GCGCATGAGA CCTGACCGTA TTGTAGTAGG AGAGGTCCGG GGAGGAGAGG CCCTAGACAT GCTCCAAGCC ATGAACACAG GTCATGATGG TTCTCTGACA ACAGGTCACG CCAATTCCCC TAGAGATATG CTGTCTCGCC TGGAAACTAT GGTTTTAATG GCAGGTATGG ACCTACCAAT CAGGGCAATA AGAGAACAAA TTGCTTCAGC CATTGATTTA GTTGTCCAGC AGAGTCGATT AGAGGATGGT TCAAGAAAAA TAACGCAAGT TAGTGAAGTT CAGGGTATGG AAGGAGATGT TATTACAATG CAAGACTTAT TCACCTATAA ACGCCAGGGT CGGGATTCCA AAAATAAAAT TACTGGTAAA CACGAGTCAA CGGGCTTTAC TCATGCTTTT TTAGAAAAAA TGGAGATGAA CTAA
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Protein sequence | MSNKLEKLRQ RQAALLKQAR EIWDKQFTEN RELTEQEYKQ YQKLMKDISK LKDKINEELR LKELEENLNS SEQANLNAEG KQEVNLESEG EQPVSSEPAS SETESEQQLN SETKSEHDNS EQAEGQETTD KVENEDETKT ETVNNQSQTD DSNTHDSAYD NDQDPKQKWI VGMEEKNQSQ HESRNQKADV QLGEVLPPEN TETENNENGR GKASLLSRLN KRKQEAALME SAKGSNKSNQ PNNQTTSQPK SGKNGRAKAN GQVEDKDDFR ELKSRLHRAL IDEIDKDILQ ESNSEDEELE LKSEIEETVE NLLDQEEKPL SSTDRDKIKA EILNETLGFG PITPLIEDEN VSEIMVNGHD QVYVEENGKL KLTDIKFRDE QHVIHVIEKI VAPLGRRIDE SSPMVDARLP DGSRVNAIIP PLSLTGPVIT IRKFSEDPLT AKDLISFGTM TTEISDFLKK CVKNRLNVVV SGGTGSGKTT TLNVLSSFIP QDERIVTIED AAELTLHQDH VVTLETKPPN MEGKGAITMR ELVRNSLRMR PDRIVVGEVR GGEALDMLQA MNTGHDGSLT TGHANSPRDM LSRLETMVLM AGMDLPIRAI REQIASAIDL VVQQSRLEDG SRKITQVSEV QGMEGDVITM QDLFTYKRQG RDSKNKITGK HESTGFTHAF LEKMEMN
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