| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_2312 |
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| Symbol | |
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| ID | 6315789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010718 |
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| Strand | - |
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| Start bp | 2458801 |
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| End bp | 2460594 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 642644700 |
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| Product | diguanylate cyclase with GAF sensor |
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| Protein accession | YP_001918466 |
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| Protein GI | 188586921 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 99 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGTAAAA TTCTGGAGAA ACGACTTAAT CAAGGGGTAG CACTGGCCTC TAGCCTGGTA
CTTTTGACTT TGTTATGGAT AACTTTAGTC AATGCCGGTT ATCGCGAAAA TGTGTTTACT
TACGAGTTTA TCGTTTTACT TGCTTTAACA ATAGTAATGG AAAGAATTCG AATTCCGGCA
GGTAGAATTA GTCTATCTCT TAATTTTGCA CTAGTATTTT CGGCATTAGT CATATTAGGT
TTTTATCCTT CTATTTGGAT TGCCACTGTG GGAATTGCCT TTCATTCCGC AGTTTTTTCA
AATAGACCAG GAAGTGTAGC GCTTTTTAAC GGAGCTATGT TTGGAGTTAC ATTTTATGTG
GCAGGCTTGG CTTATCAGCA GGCTGGAGGT GTAGTAGGTT TAGGTGAAAT GACTGGCCCA
TTGCCAGTAA TTATTTATGG ACTGGTCAGT CTAGCGGTTA ATCATACAAT TTTAACCACT
TATATCAAAT TTGTTGTAAG TTATCGGGAA TACAGCTTTT CAGATGTGTT AAAAAACGTT
GGGTGGGATG TGGTTACATA CGGAGTTAGT TTACCTGTAG CTGTGTTGAT GATAATGTTG
TACAATAATA TTGGTATTTT AGGTATTGTA GTCATGGTTA TGGCACTAGG ACTTAACAGT
TATATTTTTC GCCTGTACAA AAAGCTTGAT CAGTTTCATC AAGAACTTCA TTCATTACAA
AAAACTTCTG TTAACTTAAT TGAGAGTATG GAACTGGATG ATGTTTTACA GGCTATCACC
AGAGCTAGTA AAACCATGTT TGATACTAAA AAATGTGGGA TTTGGATTTA CGATGACAAG
CAGGGATTTA AACTTACCTT AATTAACGGG GAATCTCCAG AGCGCACTAT TATCCTAGCT
GAAGGTGAGG GTATCACTGG AAAAGTTAGT CACCGCAAGA CCCCCTTATT TATCAATAAC
ATTAATCATC CAGAATGGCA GGAGGCTGCC AGTGCAGAAG GATTATACGA TAAAGAGGAA
TCAATTCTGG TAACTCCCTT AATTTGTCAA AACAAAATTA TTGGGGCTCT GTCTTTAACC
AGAAATAATT TTATAGAGCA TTTGGAAAAG GATGAACTTA TCCAACTGAC AGAAATTTTT
TCTGCTCAGG TAGCTTCTGC TCTTTCCAAT GCTCTGCATC ATCAGAAAGT GGAGGATTTA
GCAGTGACTG ACGAGAAGAC CAATTTGTAT AATTATAGGT ACTTTTATAA ACAGCTAGAA
CAGGCAATTT ACGATTATCC AGAACGATCT TTGACCATGT TGATGATAGA CATTGATGAC
TTCAAACTTT ATAATGATAG ATTCGGACAC CCGGCAGGGG ATGAAGTCTT AGAAATTATA
TCCAAATTAT TAAAAGATAA TATTCGGGAC AGGGACATTG CTTGTCGCTA TGGTGGAGAG
GAGTTTAGTG TTTTATTATT GGGAGCACGA GGAATAGAAG CGGAAAAAAT TGCCGAGCGA
ATTCGCAGTG CCATAGCAAA TTATCCTTTC CCAGGGGATG AGAAAACTCC CAAAGTCAAA
TTAACAGTCA GTATTGGTGG GGCTGAATAT CCCCAGGATG GCACTAGCTC TATGGATTTG
ATGAGAAAAT CTGATCAGGC TCTGTACTTA GGGTCCAAAA AGCAAGGTAA AAACAGGGTC
AGCATGTTTA AAAAAATAAC TGAACTTCAT TCAGTACAGG ACGATGAAAA AAAAATTGTG
GGATTCCCCA ATAGAGGGGT GGATGGAAAT GGCTCAAATC GAGGGGATAA TTAA
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| Protein sequence | MGKILEKRLN QGVALASSLV LLTLLWITLV NAGYRENVFT YEFIVLLALT IVMERIRIPA
GRISLSLNFA LVFSALVILG FYPSIWIATV GIAFHSAVFS NRPGSVALFN GAMFGVTFYV
AGLAYQQAGG VVGLGEMTGP LPVIIYGLVS LAVNHTILTT YIKFVVSYRE YSFSDVLKNV
GWDVVTYGVS LPVAVLMIML YNNIGILGIV VMVMALGLNS YIFRLYKKLD QFHQELHSLQ
KTSVNLIESM ELDDVLQAIT RASKTMFDTK KCGIWIYDDK QGFKLTLING ESPERTIILA
EGEGITGKVS HRKTPLFINN INHPEWQEAA SAEGLYDKEE SILVTPLICQ NKIIGALSLT
RNNFIEHLEK DELIQLTEIF SAQVASALSN ALHHQKVEDL AVTDEKTNLY NYRYFYKQLE
QAIYDYPERS LTMLMIDIDD FKLYNDRFGH PAGDEVLEII SKLLKDNIRD RDIACRYGGE
EFSVLLLGAR GIEAEKIAER IRSAIANYPF PGDEKTPKVK LTVSIGGAEY PQDGTSSMDL
MRKSDQALYL GSKKQGKNRV SMFKKITELH SVQDDEKKIV GFPNRGVDGN GSNRGDN
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