Gene Nther_2311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_2311 
Symbol 
ID6314650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp2456652 
End bp2458832 
Gene Length2181 bp 
Protein Length726 aa 
Translation table11 
GC content41% 
IMG OID642644699 
Producthelicase, RecD/TraA family 
Protein accessionYP_001918465 
Protein GI188586920 
COG category[L] Replication, recombination and repair 
COG ID[COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 
TIGRFAM ID[TIGR01448] helicase, putative, RecD/TraA family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones97 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATGG CTCAAATCGA GGGGATAATT AAACGAGTAA CATATCATAA TCCGGAAAAT 
ATGTTTACAG TAGCCAAACT GGTCACTCAA GAGACGAGAA ATGAAATTAC TATAGTAGGC
AATATGCCTC ATTTGACTCC AGGAGAACGC TTGGACCTTT CCGGAGAATA TGTTGATCAT
AAAAAATTCG GGAAACAGTT CCAGGTTGAT AGCTATGAAA TAAAATTACC TGTAACAGTA
GATGGATTAA TTAAATTTCT CAGTTCGGGG ATGATTAAAG GGATTGGCCC CAAAACAGCG
GAAAGTCTGG TGGAGCACTT CGGTAAAGAA GTGCTCCAAG TTATTGAAAA TACACCGGAA
AAGTTACAGG AAGTACCCGG AATCGGCAAG GAAAAAGCAG CTCAGATATC CAGGGGATTC
CAAGAGCACA AGCAGATTAA AGATATTATG GTATTTTTAC AGGAATTTGG AGTAAGTCCT
GCTTTTGCTC TGAAAATTTA CCGCCGTTTC GGTGACAATA CAATTCAAAA GGTATCTGAA
AATCCATATT CACTTGCTAG AGAGGTCTTT GGGATTGGAT TTAAAACTGC TGATAAAATA
GCCCGGGAAA TGGGTGTTTC AGTAGACTCC GAGGAGCGAG CCAAGGCTGC TGTAGTCTAC
CTATTAGAAG AGAAATCTCA AGATGGTAAT ACTTTTTTGA AAAGAGAAGA ATTAATAGAA
GCATTAAAGG AATTGGAAGT AGAGAATGTC AATTTAAATT CTGTGCTGGA AGAATTAGTC
GAAGAAAAAG AAATAGTGGT TGAAAATATC CCTGAAGCAG GTGAGCTGAT TTATCCGGCT
CCCTTCTTTT TTGCTGAACA GGGAATTGCC AGTAGATTAA AAAGGTTAAA AGATGGAGTG
GACAGGGAAC TATTTCCTAG GATCCAGAAA ATAGCAGAAA AGTATTTGGA AGAGCAGGCA
AATTTAGTTC TTTCTCCGGA ACAGCATCAG GTGATAAAGC AGGTGCCTGA AACAGGTTTG
ATGGTGGTCA CAGGTGGACC TGGTACAGGT AAAACAACAG TGATCAAGTG CTTGATGGAT
ATATTTCAAA AAGCCGGACA GAAAGTTATG CTCGCTGCTC CTACGGGTAG AGCTGCCAAG
CGTATGAGTG AAGCCACAGG TGATGAAGCT AAAACTATTC ACCGGTTGCT TGAATTTACC
TATGATAAGG AAGAGGGAAT GAAATTTCAG CGCAATCAAG ACCGTCCACT GAAAGGTGAT
CTATTAATTG TGGACGAGGC ATCCATGATA GATACGATTT TAATGAACAA TCTGTTAAAG
GCAATATCAC CTGGGACTCG ACTGGTCCTG GTAGGGGATA CTGATCAACT ACCCTCAGTT
GGGGCTGGCA ATGTCCTTCA GGATATCATC GAATCAGGAC GGATACCTTT GGTCAGGTTA
AAGAGAGTTT TTCGCCAGGC CAGAGAAAGT ATGGTTGTGG TCAACGCTCA TAGAATAAAT
GAGGGGAAGT TTCCCATTTT GAATGCCAAG GGAAAGGACT TTTATTTTTT ACCCAGAGAA
GAACCTGAAG ATGTTGTTAA GACAATTATT TCACTGTGTG CCAAGCGCTT GCCTAACTAC
AACGGTTATC ACCCTGTAAA CGATATTCAG GTTCTGTCTC CCATGAGAAG GACAGTAACG
GGGGTAGAAA ATTTGAATCA ATCTCTTCAA AAAGTTCTCA ATCCTCCGCA AAAAAATAAG
GCTGAAATTA ACTTTGGTGG TGCTTGTTAT CGAACAGGGG ATAAAGTCAT GCAGGTCAAA
AACGATTATG AAAAGAATGT TTTTAATGGA GATACAGGAA TTGTAACCAA GGTGGATGCG
GAAGAAAATG TAGTTAACGT TAGATATGGG CATGGTGAAG AGATAGCCTA TGAAGGCAGG
GAACTAGACG CTTTAGTCCA CGCCTATTGC ATTAGTGTGC ACAAGAGTCA GGGAAGTGAA
TACCCGGTGG TTGTTTTGCC AGTGACAACA CAGCATTACA TCATGTTACA GAGAAATCTA
CTGTACACAG CTGTTACTAG AGCTAAATCT CTAGTAGTTT TGGTCGGGAC CAAAAAATCA
ATTGGGATAG CAATTTCAAA CAAAAAAACC GATGAGCGAA ATACCTTCCT ACAGCACAGA
ATTGCGGTCT ATGAGGTTTA A
 
Protein sequence
MEMAQIEGII KRVTYHNPEN MFTVAKLVTQ ETRNEITIVG NMPHLTPGER LDLSGEYVDH 
KKFGKQFQVD SYEIKLPVTV DGLIKFLSSG MIKGIGPKTA ESLVEHFGKE VLQVIENTPE
KLQEVPGIGK EKAAQISRGF QEHKQIKDIM VFLQEFGVSP AFALKIYRRF GDNTIQKVSE
NPYSLAREVF GIGFKTADKI AREMGVSVDS EERAKAAVVY LLEEKSQDGN TFLKREELIE
ALKELEVENV NLNSVLEELV EEKEIVVENI PEAGELIYPA PFFFAEQGIA SRLKRLKDGV
DRELFPRIQK IAEKYLEEQA NLVLSPEQHQ VIKQVPETGL MVVTGGPGTG KTTVIKCLMD
IFQKAGQKVM LAAPTGRAAK RMSEATGDEA KTIHRLLEFT YDKEEGMKFQ RNQDRPLKGD
LLIVDEASMI DTILMNNLLK AISPGTRLVL VGDTDQLPSV GAGNVLQDII ESGRIPLVRL
KRVFRQARES MVVVNAHRIN EGKFPILNAK GKDFYFLPRE EPEDVVKTII SLCAKRLPNY
NGYHPVNDIQ VLSPMRRTVT GVENLNQSLQ KVLNPPQKNK AEINFGGACY RTGDKVMQVK
NDYEKNVFNG DTGIVTKVDA EENVVNVRYG HGEEIAYEGR ELDALVHAYC ISVHKSQGSE
YPVVVLPVTT QHYIMLQRNL LYTAVTRAKS LVVLVGTKKS IGIAISNKKT DERNTFLQHR
IAVYEV