Gene Nther_2309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_2309 
Symbol 
ID6314648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp2452770 
End bp2455223 
Gene Length2454 bp 
Protein Length817 aa 
Translation table11 
GC content40% 
IMG OID642644697 
Productpeptidase S16 lon domain protein 
Protein accessionYP_001918463 
Protein GI188586918 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1067] Predicted ATP-dependent protease 
TIGRFAM ID[TIGR00764] lon-related putative ATP-dependent protease 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones90 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGAAC AAATTGCACC GTTAAAGAAG GAACAGTTGA AAGCTTATTG TGATGAATCT 
CAGTTTGAAT TCAACACAAC AGAAGAACTG GAACCATTAA AAAGCATTAT TGGTCAAGAC
CGGGCGGTAA AGGCTATGGA ATTTGGCCTA CAGATTAACC GTCAAGGCTA CAATCTTTAC
ATGTCCGGCC CAACCGGTAC TGGAAAAACC AGTTATGCCA AGGCCATGAC CGAAACCTAC
GCCAAAAAGT TTGATCCACC TTCTGATTGG TGCTATGTAT ATAACTTTAA TGAACCTGAA
TCACCTCGAG CCCTTGAATT ACCTGCTGGT GAAGGCTGCA ATTTAGTTGA AGGGATGGAA
AATCTCCTAG AAGAGGTAGG AGACGCCTTA ACTAAGGCCT TTAAGACTGA AACTTATGAA
GAAAGCCGTG CACAAATTTT TAGGGACTAT CAGGCCAAGC GCCGCGAACT AGTTGATAAA
TTGAACGAAG AAGGTGAAGA ATACGGATTT CGATTTAAAA ACACTTCTTC AGGAATAGTA
TCTGTCCCTG TTGTTGATGG TAAAGAACTC AATCAGGACG AGTTTGACGA ATTAGATACA
GAAACCAAAC GAGAAATTGA AGAGAACTCT TCTAAACTCC ACGTAAATGT AATGAATCTT
ATGCGCGAAC TAAAGGATTT AGATCGTGAC TTAAAAGATG AACTGGATAA ATTAAAAGAT
GAAACAGCTC ATCAAAGTCT ATCTCCTTTA ATGGATCCCA TGAAAGAGCG CTATCAATCC
AATGACAAAG TTTTAGAATA CCTGGAAGAG GTAGAAGAGG ATATCGTTAA AAATGTAGAA
CATTTCATTT CCAAAGATGA CGATGGAGAT GACGGAGGAC TATCTTTTTT AAAACCCCAG
GCATCAAAGG AGGATATAAC CAAGCGGTAT CAGGTCAATC TTCTGGTGGA TAATTGCGAA
CAAGAAGGGG CTCCAGTAGT TGTAGAAACT AACCCCACAT ATTACAATCT CCTGGGAAAA
ATGGAATATG TCAATAAAAT GGGAACTGCC GTTACGGACT TTAACATGAT TAAACCGGGA
GCTTTTCACA GGGCCAATGG GGGTTATTTG ATTCTCCAGG CCAAAGATGT TCTTAAAACT
CCCATGACCT ACGAATTATT AAAACGAGTA TTGAATACAG GTCAGCTCAG ATTGGAAAAT
TTGGGTGAAC ATATAGGTAT GATTGCCATG TCTTCTCTCA GACCGGAAGA TATTCCTCTT
AATGTAAAAG TTATCATAGT GGGAAATGAA AAATTGTATC AGCTTTTATA CCAGCTGGAT
GAAGAGTTTT CCAAGTTATT CAAAATCAAA GTAGATTTTG ATTCAACCAT GAATAGGACT
CAGGAAAATG TAGAGAAAAT GGCATCATTT ATCGCTTCCC ATTCTCAGGA TGAGGAGTTT
AAATCATTTA CCCCTTCGGG AGTAGCCAGT GTGGTAGAGT ACAGTTCTCG CTTAGCTGGG
CATAAAAAGA AACTATCAAC CAAGTTTAAT GAAATAGTAG AAATTATGTC TGAAGCGGAT
ACCTGGGCTG CCCTAGAAGG AGAAGACGAT GTTTCCCGTG AACACGTCAT AAAAGCAATC
CAAGAGAAAA AGTATCGAGT CAACAGACCT GAAGAAAAAA TTCAAGAACA AATTGATGAA
GGAAATATCA TGGTCGATAC AGCCGGAGAA GTGACAGGTC AGGTCAACGG ACTGGCAGTT
TATGATCTAG GGGATTTAAT GTTTGGAAAA CCCTTCAGGA TAACAGCCAA TGTCTTCCCC
GGTGAACGCG GTATTATTAA TATTGAACGG GAAGCTAAAT TGAGCGGAAA AATTCACGAC
AAAGGAGTGC TAATTTTATC CGGCCTGATA AATGGCCTGT TTTCATATAA TCAAAAGCTA
GGCCTGTCTG CTAGCCTGTG TTGTGAACAA ACTTATGGGG GCATAGACGG GGATAGTGCT
TCCAGTACGG AGGTATATGC TATCTTGTCG AGTGCCGGTG AAATTCCCTT ACGACAGGAT
TTGGCCGTAA CAGGCTCTGT CAATCAAAAA GGTGAAATCC AGCCAGTAGG TGGTGTCACT
GAAAAGATTG AAGGATTTTT CACTACCTGT AAGATAAAAG GATTAACGGG TACCCAAGGT
GTTATCATTC CGAAACAGAA TGAAAATAAT CTTAACTTAT CAGAAGAAGT GATTGAAGCT
TGTGAGAGAG GAGATTTCCA CATCTATTCT ATTTCTCACA TTGATGAGGG TATGGAATTG
TTATCGGGAA TGACTGCTGG CTTACTTGAT AAAAATGAGG AAGAAGATAC AGTTTATAAG
CGTGTAAAAA ATAGACTGAT TGAGTTCAGG AAGAATTTAA AATCAAAACA AGTAGTTAAA
ACTAGTCAAG ATCAAAACAA GGAACAGGAT GAAAATAGAG AACCACCACA CTAA
 
Protein sequence
MSEQIAPLKK EQLKAYCDES QFEFNTTEEL EPLKSIIGQD RAVKAMEFGL QINRQGYNLY 
MSGPTGTGKT SYAKAMTETY AKKFDPPSDW CYVYNFNEPE SPRALELPAG EGCNLVEGME
NLLEEVGDAL TKAFKTETYE ESRAQIFRDY QAKRRELVDK LNEEGEEYGF RFKNTSSGIV
SVPVVDGKEL NQDEFDELDT ETKREIEENS SKLHVNVMNL MRELKDLDRD LKDELDKLKD
ETAHQSLSPL MDPMKERYQS NDKVLEYLEE VEEDIVKNVE HFISKDDDGD DGGLSFLKPQ
ASKEDITKRY QVNLLVDNCE QEGAPVVVET NPTYYNLLGK MEYVNKMGTA VTDFNMIKPG
AFHRANGGYL ILQAKDVLKT PMTYELLKRV LNTGQLRLEN LGEHIGMIAM SSLRPEDIPL
NVKVIIVGNE KLYQLLYQLD EEFSKLFKIK VDFDSTMNRT QENVEKMASF IASHSQDEEF
KSFTPSGVAS VVEYSSRLAG HKKKLSTKFN EIVEIMSEAD TWAALEGEDD VSREHVIKAI
QEKKYRVNRP EEKIQEQIDE GNIMVDTAGE VTGQVNGLAV YDLGDLMFGK PFRITANVFP
GERGIINIER EAKLSGKIHD KGVLILSGLI NGLFSYNQKL GLSASLCCEQ TYGGIDGDSA
SSTEVYAILS SAGEIPLRQD LAVTGSVNQK GEIQPVGGVT EKIEGFFTTC KIKGLTGTQG
VIIPKQNENN LNLSEEVIEA CERGDFHIYS ISHIDEGMEL LSGMTAGLLD KNEEEDTVYK
RVKNRLIEFR KNLKSKQVVK TSQDQNKEQD ENREPPH