Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_2298 |
Symbol | |
ID | 6314455 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | + |
Start bp | 2442980 |
End bp | 2444098 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 642644686 |
Product | polysaccharide deacetylase |
Protein accession | YP_001918452 |
Protein GI | 188586907 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00169633 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 82 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTGC CAAAATTTAC GTTGTTAATC ATTACTATGT TAGCACTTCT GACAGTCTCT GCTAATCTAG TAGATCCCCC GATCACAGAA GCTGCCACAA AACAGAGTAC TCAGAACCAG GGAGGCGTGG TTGAACAGAT CCACATCGTA GTAGACGACA CAGCTTTAGA GACACCAGGT AGATTGCAAA ATGGTAGAAC TATGGTACCG CTAAGGGGCG TTTTTGAACA GGTTGGAGCC AGCGTCAACT GGGACAGTGA AGAGGAGATT ATCACCATTA TCAAAGATTG GGATAGATTA GAATTAAGCC CTGGTACTAA AAAAGCTGAA AAAAATTATG ATGAAATAAT AAAATTGGAA GAGGCACCAT TCACCAGTAG GGGAACTACC TGGCTCCCCT TGAGAGCCAT TGGAGAATTG TTCGACTTAG ATGTAGATTG GGTTAGTGAG CACGATTTAG TAAGGATTAG TACAGGTGAA CAAGAAAAAG ATATTGGAAA AATTGCTGAA GATTTAAAAC CAATTGAGAC AGATCAAAGT GGTAAAGTTG TCTACTTAAC CTTCGATGAT GGTCCCAGTC ATATTACACC TGAAGTTTTG GATATCCTGG ACGAGTACAA TGCCAGGGCA ACTTTTTTCG TGATTGGTCA ACAGGCGGAA GCCATGCCAC ATATTATTCG AAGAATCCAC AATGAAGGCC ATCTAATTGC TAATCACAGT TATACCCACG ATTATGATAA AGTTTACGAT TCTCCCGAAT CCTTTGAAGA GGAATTATTA AAAACGGAGG AAGTAATCAA AGATATCACA GGGAAAAGAA CCACAATATT TCGACCACCG GGTGGAGAAC ATCCTAATAT GACCGATGAA AAAAGAGAAA TTCTACAAGA ACACGGCTAC ACCTTATATA ACTGGAGTGT GTCGGCTGGA GATACTGCCA CTCCTACGCC AAGCTCTGAA GTTATAAAAA ATAATGTACT GGGTGGAGTG CGAGGCAGTA ATGGAGCTGT TGTATTGATG CACGATTCAG CAAGTAGAGA AAACACTAAA AAAGCCCTCT CAGAAATTCT GAGAGAGCTC AGCTTCGAAG GTTATAGTTT CCCCACCTTA CCACAATAA
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Protein sequence | MKLPKFTLLI ITMLALLTVS ANLVDPPITE AATKQSTQNQ GGVVEQIHIV VDDTALETPG RLQNGRTMVP LRGVFEQVGA SVNWDSEEEI ITIIKDWDRL ELSPGTKKAE KNYDEIIKLE EAPFTSRGTT WLPLRAIGEL FDLDVDWVSE HDLVRISTGE QEKDIGKIAE DLKPIETDQS GKVVYLTFDD GPSHITPEVL DILDEYNARA TFFVIGQQAE AMPHIIRRIH NEGHLIANHS YTHDYDKVYD SPESFEEELL KTEEVIKDIT GKRTTIFRPP GGEHPNMTDE KREILQEHGY TLYNWSVSAG DTATPTPSSE VIKNNVLGGV RGSNGAVVLM HDSASRENTK KALSEILREL SFEGYSFPTL PQ
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