Gene Nther_2291 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_2291 
Symbol 
ID6314448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp2434869 
End bp2436251 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content43% 
IMG OID642644679 
ProductMATE efflux family protein 
Protein accessionYP_001918445 
Protein GI188586900 
COG category[V] Defense mechanisms 
COG ID[COG0534] Na+-driven multidrug efflux pump 
TIGRFAM ID[TIGR00797] putative efflux protein, MATE family 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGGG GAGCTCAATT AGCCCAGCAG AATAAACGCG ACCTGACTAC AGGTAGTATA 
CCGAAAAAAC TAATAAGATT GGCACTTCCC ATTATGGGGG GTATGTTTCT CCAAACGATA
TTCAATATAG TAGACACTTT TTTTGTAAGT CAGCTGGGTC ATAATGCTAT TGCGGCAGTT
AGCATGAATA TGCCCATCTT ATTTATTCTA ATAGCCATGG GTAATGCTGT GGCCGTTGGT
ACCAGTTCTT ATATTGCTCG CAGTATTGGA GCAGGCGAAG ATGAAAAAGC ACGGAAAACA
GCATCCCAAG CCATAACCCT GGCAGTAATC CTAGGGATAG TTGCCACAAT TATAGGTGTC
AGTTTTGCCC CATATATAAT TTCATTTATG GGAGCCGAAG GAGAATTGTA TTCTTTGGCA
GTGGAATATA CCAGCATCAT ATTCTGGGGT AATTTGATAT TCTTTTTATT TTTGGCTTTA
GATGGAGTTC TCCGGGGAGA AGGAGATATG AAAACCTCAA TGATGAAGCA AGTGGTTGGG
GTTGGTTTCA ATATTCTTTT GGATCCGATT TTTATATTTG GACTGGGGCC TGTGCCTGCC
ATGGGAGTTG CAGGAGCGGC CTTAGCCATA GTACTTAGTA GGTTTTTAGG ATTATTATTT
CTGGTATGGC ACTTTTCTAC GGGAAGGTCT ACAATTAAAT TTAATATGAC CAAGTTTGTC
TTTGAATCGG AAATTATCAA ACAAATCATG GCTGTCGGAT TGCCTACATC AGCCTCTCAG
GCCATGATGT CTTTGACTCT GTTTGTATAC AATCGTCTAG CTTCTGGTTT CGGTGACGAA
GCCGTGGCTG CCCTGGGCCT TGGCTTTAGG ATAGATTCCC TGGCAATACT GCCTGGAATT
GCTATTGGAA TTAGTATGGT TACCATGGTG GGACAAAATT ATGGAGCTGG TGAACTCGAA
CGAGTACGTA GGTCTTATTG GACTGCCCAG GCCATGGCTG CTGGTTTTAT GGCCTCTGTA
GGTGTATTTT TATTTGCGTT TCCGGAATTT TTTATTGGCA TATTTTCCCA GGAACAAGAC
GTTATGAGTC ACGGAGTCAG TTACCTTAGG ATATTACCTA TCTTTTATCC CTTCCTGGGT
AGTGGCCTGA TTTCAGCTCA TTCATTCCAA GGACTGGGCA AAGCCATTCC GGCTCTGATT
ATCAGTCTAA TCAGGGTTGG TCTGGTGGGG ATCCCTCTGG CTCTATTTTT GACTTCTCAA
ACTGGTTTGG GAGCGTCCGG AATCTGGCTA GCCCTTGGAT TAAGTGATTT CACCTTTTTC
GGTGTGGGAA TGCTTTGGTT CAAGAGTACC TTTAAGAGGA TGACTAGATT TGTCCATTCA
TAG
 
Protein sequence
MAGGAQLAQQ NKRDLTTGSI PKKLIRLALP IMGGMFLQTI FNIVDTFFVS QLGHNAIAAV 
SMNMPILFIL IAMGNAVAVG TSSYIARSIG AGEDEKARKT ASQAITLAVI LGIVATIIGV
SFAPYIISFM GAEGELYSLA VEYTSIIFWG NLIFFLFLAL DGVLRGEGDM KTSMMKQVVG
VGFNILLDPI FIFGLGPVPA MGVAGAALAI VLSRFLGLLF LVWHFSTGRS TIKFNMTKFV
FESEIIKQIM AVGLPTSASQ AMMSLTLFVY NRLASGFGDE AVAALGLGFR IDSLAILPGI
AIGISMVTMV GQNYGAGELE RVRRSYWTAQ AMAAGFMASV GVFLFAFPEF FIGIFSQEQD
VMSHGVSYLR ILPIFYPFLG SGLISAHSFQ GLGKAIPALI ISLIRVGLVG IPLALFLTSQ
TGLGASGIWL ALGLSDFTFF GVGMLWFKST FKRMTRFVHS