Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_2291 |
Symbol | |
ID | 6314448 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | - |
Start bp | 2434869 |
End bp | 2436251 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 642644679 |
Product | MATE efflux family protein |
Protein accession | YP_001918445 |
Protein GI | 188586900 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 74 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGGGG GAGCTCAATT AGCCCAGCAG AATAAACGCG ACCTGACTAC AGGTAGTATA CCGAAAAAAC TAATAAGATT GGCACTTCCC ATTATGGGGG GTATGTTTCT CCAAACGATA TTCAATATAG TAGACACTTT TTTTGTAAGT CAGCTGGGTC ATAATGCTAT TGCGGCAGTT AGCATGAATA TGCCCATCTT ATTTATTCTA ATAGCCATGG GTAATGCTGT GGCCGTTGGT ACCAGTTCTT ATATTGCTCG CAGTATTGGA GCAGGCGAAG ATGAAAAAGC ACGGAAAACA GCATCCCAAG CCATAACCCT GGCAGTAATC CTAGGGATAG TTGCCACAAT TATAGGTGTC AGTTTTGCCC CATATATAAT TTCATTTATG GGAGCCGAAG GAGAATTGTA TTCTTTGGCA GTGGAATATA CCAGCATCAT ATTCTGGGGT AATTTGATAT TCTTTTTATT TTTGGCTTTA GATGGAGTTC TCCGGGGAGA AGGAGATATG AAAACCTCAA TGATGAAGCA AGTGGTTGGG GTTGGTTTCA ATATTCTTTT GGATCCGATT TTTATATTTG GACTGGGGCC TGTGCCTGCC ATGGGAGTTG CAGGAGCGGC CTTAGCCATA GTACTTAGTA GGTTTTTAGG ATTATTATTT CTGGTATGGC ACTTTTCTAC GGGAAGGTCT ACAATTAAAT TTAATATGAC CAAGTTTGTC TTTGAATCGG AAATTATCAA ACAAATCATG GCTGTCGGAT TGCCTACATC AGCCTCTCAG GCCATGATGT CTTTGACTCT GTTTGTATAC AATCGTCTAG CTTCTGGTTT CGGTGACGAA GCCGTGGCTG CCCTGGGCCT TGGCTTTAGG ATAGATTCCC TGGCAATACT GCCTGGAATT GCTATTGGAA TTAGTATGGT TACCATGGTG GGACAAAATT ATGGAGCTGG TGAACTCGAA CGAGTACGTA GGTCTTATTG GACTGCCCAG GCCATGGCTG CTGGTTTTAT GGCCTCTGTA GGTGTATTTT TATTTGCGTT TCCGGAATTT TTTATTGGCA TATTTTCCCA GGAACAAGAC GTTATGAGTC ACGGAGTCAG TTACCTTAGG ATATTACCTA TCTTTTATCC CTTCCTGGGT AGTGGCCTGA TTTCAGCTCA TTCATTCCAA GGACTGGGCA AAGCCATTCC GGCTCTGATT ATCAGTCTAA TCAGGGTTGG TCTGGTGGGG ATCCCTCTGG CTCTATTTTT GACTTCTCAA ACTGGTTTGG GAGCGTCCGG AATCTGGCTA GCCCTTGGAT TAAGTGATTT CACCTTTTTC GGTGTGGGAA TGCTTTGGTT CAAGAGTACC TTTAAGAGGA TGACTAGATT TGTCCATTCA TAG
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Protein sequence | MAGGAQLAQQ NKRDLTTGSI PKKLIRLALP IMGGMFLQTI FNIVDTFFVS QLGHNAIAAV SMNMPILFIL IAMGNAVAVG TSSYIARSIG AGEDEKARKT ASQAITLAVI LGIVATIIGV SFAPYIISFM GAEGELYSLA VEYTSIIFWG NLIFFLFLAL DGVLRGEGDM KTSMMKQVVG VGFNILLDPI FIFGLGPVPA MGVAGAALAI VLSRFLGLLF LVWHFSTGRS TIKFNMTKFV FESEIIKQIM AVGLPTSASQ AMMSLTLFVY NRLASGFGDE AVAALGLGFR IDSLAILPGI AIGISMVTMV GQNYGAGELE RVRRSYWTAQ AMAAGFMASV GVFLFAFPEF FIGIFSQEQD VMSHGVSYLR ILPIFYPFLG SGLISAHSFQ GLGKAIPALI ISLIRVGLVG IPLALFLTSQ TGLGASGIWL ALGLSDFTFF GVGMLWFKST FKRMTRFVHS
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