| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_2229 |
|---|
| Symbol | |
|---|
| ID | 6315230 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010718 |
|---|
| Strand | - |
|---|
| Start bp | 2367254 |
|---|
| End bp | 2368849 |
|---|
| Gene Length | 1596 bp |
|---|
| Protein Length | 531 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 642644617 |
|---|
| Product | flagellar hook-associated 2 domain protein |
|---|
| Protein accession | YP_001918383 |
|---|
| Protein GI | 188586838 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1345] Flagellar capping protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0000000000532748 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | TTGCGACTTG GAGGATTAGC AACAGGTTTT GATACAGAAA ACCTGGTAAA ACAGCTAGCA
GAATTAGAAA GACAACCTAT TCAGCGCCAC GAACAGGATA TCCAAGAGAT AGAAGGAGTT
AAAGACGCAT GGCGAAATGT CAATAAACTG TTATCGGGAG TTAGTGATGA ACTCTCTGGA
CTTCAGAGTG AAGATACCTT TCAAGGTATG GAAGCCAGCT CTACTAATGA AAATATTGAA
GTTTCCGCTG ACAATCAAGC AGTAGAAGCA GATTATGCAT TTGAAATACA GCAAAAAGCC
CAAAATCAAA GACTGGCTTC ACTAGACACT ATAAACAATG TGGAAAATGA AGATGGTCAC
AAAGGTACTC TGACCTTTGA TTTTGGTGAT GAAGAATTTG ATATTAAAGT GGACGAATCA
GACACCATTC AGGACATCGC TGATAAAATC AATAACAATG AGATAGAAAA TAATGACGAT
AAAACCATTC CCATGGGTGC TACCGTCATA GCTGGTGAAT ACTTAGAGTT TAACATCGAT
GAAGGATATG AACTAGAAAA TATTGAGGCA GACAATGAGG AAAAGGCAGA CAATGATGGA
GACAGTGACT TATTAGGCTG GCTGCAACTA GATGCTGATA TAAAGAACGA TGATGAAGAA
AATAATGATG TTAATGAAGA TGATAGAGAA GTACTGCAAG TGCAAGAAAG CCAAAATGCC
AAAGTCATAG TAAACGGCAT TCAAGGTATT GAATCTTCCA CTAATGAAAT AGAGATCGCC
GATGGTGTGG AAGTAGATAT TTCTGCAGCT ACTGAGAGTG ATATGGAGAT TCAAGAAACC
ATTTCCATAT CTCAAGATAC CGAGACTCTT ATCAATAATG TAGAAAGCTT TGAAGAAAAC
TACAACGAAG CTATCAGTGC AATTGAAGAC AAAACTGATG TTACAGTACT TGAAGATGAT
ACCCAAGAGG GTGAAGAAGA AGTTCAGTCC GGTGTTTTAC AGGGAGATAG TACCCTTAAC
AATATTACCA ATAATCTCAG AAGAGCTATT ACAGATCCGG TAGATGTCAG TGATCAAGAT
ATAGAAGTTG ATGGTAATGA AGTAGATGAA TTAGTTCCTG CACACTTCGG TATTGAAATT
GGCGGTGACA CTGTAGCTGG TGGCTCTTAC AGCGGAGCTG ATGCCAACGA GCTCACTATC
GATTACGATA GATTAGAAGA ACAGCTCCAG GAAAATCCCG AAGCAGTACA AGCTCTATTC
GCCAATGACG GCGAAGGCGG CGGAGAAGGA ATAGCCGTTC GCATGGAAGA GTACTTGGAT
GGCGTGGTTT ACGACGGTGA ACTGGACTCT ACTGGACTTC GAAATCAAAC CCAAGACCAG
AATCAAAGTG TTATCGAGAA CCGGCTTACC ACCGAAGCCA ATGAAATTGA ACGCACTGAA
AGCAGAATAG ATACTATTGA AGACCGGGCG GAAATGCGTG AAGAACAACT TTGGTCACAA
TTCACAGCTA TGGAAGAAGG AATACAAAGC GCTCAGGCTG AATCACAGTC TCTAATGCAG
GCTATGGGAG GCGGTATGGG CGGAATGATG ATGTAA
|
|---|
| Protein sequence | MRLGGLATGF DTENLVKQLA ELERQPIQRH EQDIQEIEGV KDAWRNVNKL LSGVSDELSG
LQSEDTFQGM EASSTNENIE VSADNQAVEA DYAFEIQQKA QNQRLASLDT INNVENEDGH
KGTLTFDFGD EEFDIKVDES DTIQDIADKI NNNEIENNDD KTIPMGATVI AGEYLEFNID
EGYELENIEA DNEEKADNDG DSDLLGWLQL DADIKNDDEE NNDVNEDDRE VLQVQESQNA
KVIVNGIQGI ESSTNEIEIA DGVEVDISAA TESDMEIQET ISISQDTETL INNVESFEEN
YNEAISAIED KTDVTVLEDD TQEGEEEVQS GVLQGDSTLN NITNNLRRAI TDPVDVSDQD
IEVDGNEVDE LVPAHFGIEI GGDTVAGGSY SGADANELTI DYDRLEEQLQ ENPEAVQALF
ANDGEGGGEG IAVRMEEYLD GVVYDGELDS TGLRNQTQDQ NQSVIENRLT TEANEIERTE
SRIDTIEDRA EMREEQLWSQ FTAMEEGIQS AQAESQSLMQ AMGGGMGGMM M
|
|---|
| |