| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_2222 |
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| Symbol | |
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| ID | 6315400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010718 |
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| Strand | - |
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| Start bp | 2360535 |
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| End bp | 2361071 |
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| Gene Length | 537 bp |
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| Protein Length | 178 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 642644610 |
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| Product | sigma 54 modulation protein, SSU ribosomal protein S30P |
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| Protein accession | YP_001918376 |
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| Protein GI | 188586831 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
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| TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000000345731 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 2.74921e-22 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGTCTTTGA AACTGACAAT TAGTGGTAAG AACATTGACG TTACAAACGC ATTAAAAGAA
CACATTCAGA GAAGGTTTGC AAAGCTTGAC AAGCACTTTG ACGACACAGT GGAGGCCCAG
GTCACCTTGA GTGTAATTAA AGACAACCAC AATGTCGAGG CCACCATGTT TTTGAATGGA
GGGATGCTTG TCCGGGGTGA ACAAAGTACC GGAGATATGT ACGCTTCTGT CGATCAAGTT
ATCGACAAGG TAGAGCGTCA GATCAAAAAG CATAAAACTA AAATTAACAG GAAGTTACGC
CAGTCTGGTG GCAGCCTGCT GAAAGAGGGT GCCGAGTCAA CAGAAGAAGG CAAGGATCCT
GAAATTGTTA AAACCAAGCG TTTTGCCATT AAGCCCATGA CACCTGAAGA AGCTGTACTA
CAAATGGAAT TGATCGGCCA CGACTTCTTC GTATTCAGAA ATGCAGAAAC TGAAGAAGTC
AATGTAGTCT ATAGACGTAA AGATGGAAAT TACGGTCAGA TAGAACCTGA AGTATAA
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| Protein sequence | MSLKLTISGK NIDVTNALKE HIQRRFAKLD KHFDDTVEAQ VTLSVIKDNH NVEATMFLNG
GMLVRGEQST GDMYASVDQV IDKVERQIKK HKTKINRKLR QSGGSLLKEG AESTEEGKDP
EIVKTKRFAI KPMTPEEAVL QMELIGHDFF VFRNAETEEV NVVYRRKDGN YGQIEPEV
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